Analysis of interatomic Contacts of Structural Units in PDB entry:
7CL6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7CL6 entry

There are 5 chains in PDB entry 7CL6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 0	VAL 284
B	ALA 2	PHE 282
C	HIS 0	VAL 284
D	HIS 0	LEU 276
E	HIS 0	GLU 161

There are 54 helices in PDB entry 7CL6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	9	Right-handed 310
Helix 2	AA2	A	22	37	Right-handed alpha
Helix 3	AA3	A	46	66	Right-handed alpha
Helix 4	AA4	A	86	90	Right-handed 310
Helix 5	AA5	A	91	96	Right-handed alpha
Helix 6	AA6	A	97	109	Right-handed alpha
Helix 7	AA7	A	170	174	Right-handed 310
Helix 8	AA8	A	187	198	Right-handed alpha
Helix 9	AA9	A	253	260	Right-handed alpha
Helix 10	AB1	B	7	9	Right-handed 310
Helix 11	AB2	B	22	37	Right-handed alpha
Helix 12	AB3	B	46	66	Right-handed alpha
Helix 13	AB4	B	86	90	Right-handed 310
Helix 14	AB5	B	91	96	Right-handed alpha
Helix 15	AB6	B	97	109	Right-handed alpha
Helix 16	AB7	B	170	174	Right-handed 310
Helix 17	AB8	B	187	198	Right-handed alpha
Helix 18	AB9	B	253	260	Right-handed alpha
Helix 19	AC1	C	7	9	Right-handed 310
Helix 20	AC2	C	22	37	Right-handed alpha
Helix 21	AC3	C	46	67	Right-handed alpha
Helix 22	AC4	C	86	90	Right-handed 310
Helix 23	AC5	C	91	96	Right-handed alpha
Helix 24	AC6	C	97	109	Right-handed alpha
Helix 25	AC7	C	170	174	Right-handed 310
Helix 26	AC8	C	187	198	Right-handed alpha
Helix 27	AC9	C	253	260	Right-handed alpha
Helix 28	AD1	D	7	9	Right-handed 310
Helix 29	AD2	D	22	37	Right-handed alpha
Helix 30	AD3	D	46	66	Right-handed alpha
Helix 31	AD4	D	86	90	Right-handed 310
Helix 32	AD5	D	91	96	Right-handed alpha
Helix 33	AD6	D	97	109	Right-handed alpha
Helix 34	AD7	D	170	174	Right-handed 310
Helix 35	AD8	D	187	198	Right-handed alpha
Helix 36	AD9	D	253	260	Right-handed alpha
Helix 37	AE1	E	7	9	Right-handed 310
Helix 38	AE2	E	22	37	Right-handed alpha
Helix 39	AE3	E	46	66	Right-handed alpha
Helix 40	AE4	E	86	90	Right-handed 310
Helix 41	AE5	E	91	96	Right-handed alpha
Helix 42	AE6	E	97	109	Right-handed alpha
Helix 43	AE7	E	170	174	Right-handed 310
Helix 44	AE8	E	187	198	Right-handed alpha
Helix 45	AE9	E	253	260	Right-handed alpha
Helix 46	AF1	F	7	9	Right-handed 310
Helix 47	AF2	F	22	37	Right-handed alpha
Helix 48	AF3	F	46	66	Right-handed alpha
Helix 49	AF4	F	86	90	Right-handed 310
Helix 50	AF5	F	91	96	Right-handed alpha
Helix 51	AF6	F	97	109	Right-handed alpha
Helix 52	AF7	F	170	174	Right-handed 310
Helix 53	AF8	F	187	198	Right-handed alpha
Helix 54	AF9	F	253	260	Right-handed alpha

There are 29 sheets in PDB entry 7CL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1	2	first strand
Strand 2	A	201	202	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	13	first strand
Strand 2	A	38	42	parallel
Strand 3	A	210	214	anti-parallel
Strand 4	A	148	154	anti-parallel
Strand 5	A	230	238	anti-parallel
Strand 6	A	113	122	anti-parallel
Strand 7	A	78	80	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	13	first strand
Strand 2	A	38	42	parallel
Strand 3	A	210	214	anti-parallel
Strand 4	A	148	154	anti-parallel
Strand 5	A	230	238	anti-parallel
Strand 6	A	113	122	anti-parallel
Strand 7	A	263	264	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	167	first strand
Strand 2	A	219	220	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	250	first strand
Strand 2	A	266	269	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	13	first strand
Strand 2	B	38	42	parallel
Strand 3	B	210	214	anti-parallel
Strand 4	B	148	154	anti-parallel
Strand 5	B	230	238	anti-parallel
Strand 6	B	113	122	anti-parallel
Strand 7	B	78	80	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	13	first strand
Strand 2	B	38	42	parallel
Strand 3	B	210	214	anti-parallel
Strand 4	B	148	154	anti-parallel
Strand 5	B	230	238	anti-parallel
Strand 6	B	113	122	anti-parallel
Strand 7	B	263	264	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	167	first strand
Strand 2	B	219	220	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	250	first strand
Strand 2	B	266	269	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1	2	first strand
Strand 2	C	201	202	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	13	first strand
Strand 2	C	38	42	parallel
Strand 3	C	210	214	anti-parallel
Strand 4	C	148	154	anti-parallel
Strand 5	C	230	238	anti-parallel
Strand 6	C	113	122	anti-parallel
Strand 7	C	78	80	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	13	first strand
Strand 2	C	38	42	parallel
Strand 3	C	210	214	anti-parallel
Strand 4	C	148	154	anti-parallel
Strand 5	C	230	238	anti-parallel
Strand 6	C	113	122	anti-parallel
Strand 7	C	263	264	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	167	first strand
Strand 2	C	219	220	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	247	250	first strand
Strand 2	C	266	269	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1	2	first strand
Strand 2	D	201	202	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	38	42	parallel
Strand 3	D	210	214	anti-parallel
Strand 4	D	148	154	anti-parallel
Strand 5	D	230	238	anti-parallel
Strand 6	D	113	122	anti-parallel
Strand 7	D	78	80	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	38	42	parallel
Strand 3	D	210	214	anti-parallel
Strand 4	D	148	154	anti-parallel
Strand 5	D	230	238	anti-parallel
Strand 6	D	113	122	anti-parallel
Strand 7	D	263	264	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	167	first strand
Strand 2	D	219	220	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	250	first strand
Strand 2	D	266	269	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1	2	first strand
Strand 2	E	201	202	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	13	first strand
Strand 2	E	38	42	parallel
Strand 3	E	210	214	anti-parallel
Strand 4	E	148	154	anti-parallel
Strand 5	E	230	238	anti-parallel
Strand 6	E	113	122	anti-parallel
Strand 7	E	78	80	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	13	first strand
Strand 2	E	38	42	parallel
Strand 3	E	210	214	anti-parallel
Strand 4	E	148	154	anti-parallel
Strand 5	E	230	238	anti-parallel
Strand 6	E	113	122	anti-parallel
Strand 7	E	263	264	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	166	167	first strand
Strand 2	E	219	220	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	247	250	first strand
Strand 2	E	266	269	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1	2	first strand
Strand 2	F	201	202	parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	13	first strand
Strand 2	F	38	42	parallel
Strand 3	F	210	214	anti-parallel
Strand 4	F	148	154	anti-parallel
Strand 5	F	230	238	anti-parallel
Strand 6	F	113	122	anti-parallel
Strand 7	F	78	80	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	13	first strand
Strand 2	F	38	42	parallel
Strand 3	F	210	214	anti-parallel
Strand 4	F	148	154	anti-parallel
Strand 5	F	230	238	anti-parallel
Strand 6	F	113	122	anti-parallel
Strand 7	F	263	264	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	166	167	first strand
Strand 2	F	219	220	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	247	250	first strand
Strand 2	F	266	269	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7CL6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7CL6