Analysis of interatomic Contacts of Structural Units in PDB entry:
7CLU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CLU entry

There are 2 chains in PDB entry 7CLU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2LEU 339
B
 PRO 2LEU 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7CLU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
14 27Right-handed alpha
Helix 3
AA3
A
28 34Right-handed 310
Helix 4
AA4
A
39 48Right-handed alpha
Helix 5
AA5
A
50 64Right-handed alpha
Helix 6
AA6
A
77 79Right-handed 310
Helix 7
AA7
A
80 85Right-handed alpha
Helix 8
AA8
A
92 102Right-handed alpha
Helix 9
AA9
A
102 108Right-handed alpha
Helix 10
AB1
A
109 117Right-handed alpha
Helix 11
AB2
A
120 126Right-handed alpha
Helix 12
AB3
A
130 138Right-handed alpha
Helix 13
AB4
A
138 153Right-handed alpha
Helix 14
AB5
A
153 164Right-handed alpha
Helix 15
AB6
A
165 169Right-handed 310
Helix 16
AB7
A
180 190Right-handed alpha
Helix 17
AB8
A
200 215Right-handed alpha
Helix 18
AB9
A
245 249Right-handed 310
Helix 19
AC1
A
250 265Right-handed alpha
Helix 20
AC2
A
285 299Right-handed alpha
Helix 21
AC3
A
306 317Right-handed alpha
Helix 22
AC4
B
4 13Right-handed alpha
Helix 23
AC5
B
14 27Right-handed alpha
Helix 24
AC6
B
29 34Right-handed 310
Helix 25
AC7
B
40 48Right-handed alpha
Helix 26
AC8
B
50 64Right-handed alpha
Helix 27
AC9
B
77 79Right-handed 310
Helix 28
AD1
B
80 85Right-handed alpha
Helix 29
AD2
B
92 102Right-handed alpha
Helix 30
AD3
B
102 108Right-handed alpha
Helix 31
AD4
B
109 116Right-handed alpha
Helix 32
AD5
B
154 164Right-handed alpha
Helix 33
AD6
B
165 169Right-handed 310
Helix 34
AD7
B
180 190Right-handed alpha
Helix 35
AD8
B
200 202Right-handed 310
Helix 36
AD9
B
203 214Right-handed alpha
Helix 37
AE1
B
245 249Right-handed 310
Helix 38
AE2
B
250 265Right-handed alpha
Helix 39
AE3
B
285 299Right-handed alpha
Helix 40
AE4
B
306 317Right-handed alpha
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There are 4 sheets in PDB entry 7CLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
73 75anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 224first strand
Strand 2
A
194 199parallel
Strand 3
A
171 175parallel
Strand 4
A
239 243parallel
Strand 5
A
270 275parallel
Strand 6
A
332 337anti-parallel
Strand 7
A
320 326anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
73 75anti-parallel
Strand 3
B
68 70anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 224first strand
Strand 2
B
194 199parallel
Strand 3
B
171 175parallel
Strand 4
B
239 243parallel
Strand 5
B
270 275parallel
Strand 6
B
332 337anti-parallel
Strand 7
B
320 325anti-parallel
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