Analysis of interatomic Contacts of Structural Units in PDB entry:
7CM3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CM3 entry

There are 2 chains in PDB entry 7CM3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 31GLN 1602
B
 ALA 192GLU 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 7CM3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 55Right-handed alpha
Helix 2
AA2
A
57 64Right-handed alpha
Helix 3
AA3
A
65 92Right-handed alpha
Helix 4
AA4
A
105 129Right-handed alpha
Helix 5
AA5
A
137 144Right-handed 310
Helix 6
AA6
A
145 148Right-handed 310
Helix 7
AA7
A
149 155Right-handed alpha
Helix 8
AA8
A
163 200Right-handed alpha
Helix 9
AA9
A
218 222Right-handed 310
Helix 10
AB1
A
254 259Right-handed alpha
Helix 11
AB2
A
265 278Right-handed alpha
Helix 12
AB3
A
281 293Right-handed alpha
Helix 13
AB4
A
294 310Right-handed alpha
Helix 14
AB5
A
311 336Right-handed alpha
Helix 15
AB6
A
373 375Right-handed 310
Helix 16
AB7
A
376 381Right-handed alpha
Helix 17
AB8
A
383 403Right-handed alpha
Helix 18
AB9
A
419 441Right-handed alpha
Helix 19
AC1
A
441 446Right-handed alpha
Helix 20
AC2
A
448 465Right-handed alpha
Helix 21
AC3
A
474 480Right-handed alpha
Helix 22
AC4
A
481 488Right-handed 310
Helix 23
AC5
A
489 501Right-handed alpha
Helix 24
AC6
A
502 529Right-handed alpha
Helix 25
AC7
A
539 552Right-handed alpha
Helix 26
AC8
A
555 568Right-handed alpha
Helix 27
AC9
A
571 589Right-handed alpha
Helix 28
AD1
A
589 603Right-handed alpha
Helix 29
AD2
A
605 617Right-handed alpha
Helix 30
AD3
A
847 855Right-handed alpha
Helix 31
AD4
A
873 883Right-handed alpha
Helix 32
AD5
A
886 904Right-handed alpha
Helix 33
AD6
A
911 914Right-handed 310
Helix 34
AD7
A
915 941Right-handed alpha
Helix 35
AD8
A
952 972Right-handed alpha
Helix 36
AD9
A
980 989Right-handed alpha
Helix 37
AE1
A
990 993Right-handed 310
Helix 38
AE2
A
994 1000Right-handed alpha
Helix 39
AE3
A
1000 1012Right-handed alpha
Helix 40
AE4
A
1013 1040Right-handed alpha
Helix 41
AE5
A
1053 1057Right-handed 310
Helix 42
AE6
A
1100 1113Right-handed alpha
Helix 43
AE7
A
1116 1128Right-handed alpha
Helix 44
AE8
A
1132 1145Right-handed alpha
Helix 45
AE9
A
1146 1163Right-handed alpha
Helix 46
AF1
A
1164 1168Right-handed 310
Helix 47
AF2
A
1169 1185Right-handed alpha
Helix 48
AF3
A
1197 1209Right-handed alpha
Helix 49
AF4
A
1209 1225Right-handed alpha
Helix 50
AF5
A
1226 1228Right-handed 310
Helix 51
AF6
A
1237 1263Right-handed alpha
Helix 52
AF7
A
1264 1269Right-handed alpha
Helix 53
AF8
A
1271 1295Right-handed alpha
Helix 54
AF9
A
1296 1312Right-handed alpha
Helix 55
AG1
A
1313 1317Right-handed 310
Helix 56
AG2
A
1318 1335Right-handed alpha
Helix 57
AG3
A
1335 1358Right-handed alpha
Helix 58
AG4
A
1374 1388Right-handed alpha
Helix 59
AG5
A
1390 1399Right-handed alpha
Helix 60
AG6
A
1419 1436Right-handed alpha
Helix 61
AG7
A
1438 1454Right-handed alpha
Helix 62
AG8
A
1463 1478Right-handed alpha
Helix 63
AG9
A
1487 1494Right-handed alpha
Helix 64
AH1
A
1498 1502Right-handed 310
Helix 65
AH2
A
1508 1523Right-handed alpha
Helix 66
AH3
A
1530 1540Right-handed alpha
Helix 67
AH4
A
1543 1548Right-handed alpha
Helix 68
AH5
A
1549 1577Right-handed alpha
Helix 69
AH6
A
1590 1602Right-handed alpha
Helix 70
AH7
B
230 237Right-handed alpha
Helix 71
AH8
B
262 288Right-handed alpha
Helix 72
AH9
B
300 317Right-handed alpha
Helix 73
AI1
B
331 341Right-handed alpha
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There are 5 sheets in PDB entry 7CM3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 209first strand
Strand 2
A
243 247anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1045 1046first strand
Strand 2
A
1090 1091anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1060 1064first strand
Strand 2
A
1083 1087anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1484 1486first strand
Strand 2
A
1527 1529anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 329first strand
Strand 2
B
375 377anti-parallel
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