Analysis of interatomic Contacts of Structural Units in PDB entry:
7CMZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CMZ entry

There are 2 chains in PDB entry 7CMZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1266PHE 1492
B
 GLY 842GLU 856
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7CMZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1276 1290Right-handed alpha
Helix 2
AA2
A
1315 1324Right-handed alpha
Helix 3
AA3
A
1331 1341Right-handed alpha
Helix 4
AA4
A
1346 1350Right-handed 310
Helix 5
AA5
A
1353 1360Right-handed alpha
Helix 6
AA6
A
1364 1387Right-handed alpha
Helix 7
AA7
A
1404 1418Right-handed alpha
Helix 8
AA8
A
1427 1432Right-handed 310
Helix 9
AA9
A
1452 1459Right-handed alpha
Helix 10
AB1
A
1466 1475Right-handed alpha
Helix 11
AB2
A
1480 1484Right-handed 310
Helix 12
AB3
A
1486 1490Right-handed 310
Helix 13
AB4
B
843 848Right-handed alpha
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There are 2 sheets in PDB entry 7CMZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1293 1294first strand
Strand 2
A
1269 1273parallel
Strand 3
A
1306 1309parallel
Strand 4
A
1327 1329parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1421 1422first strand
Strand 2
A
1398 1402parallel
Strand 3
A
1436 1439parallel
Strand 4
A
1462 1465parallel
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