Analysis of interatomic Contacts of Structural Units in PDB entry:
7CO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CO1 entry

There are 6 chains in PDB entry 7CO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 265SER 458
B
 PRO 1951GLN 1970
C
 VAL 266SER 458
D
 PRO 1951GLN 1970
E
 VAL 266GLY 457
F
 PRO 1953GLN 1970
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7CO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
322 331Right-handed alpha
Helix 2
AA2
A
359 366Right-handed alpha
Helix 3
AA3
A
387 396Right-handed alpha
Helix 4
AA4
A
401 407Right-handed alpha
Helix 5
AA5
A
408 411Right-handed 310
Helix 6
AA6
A
430 434Right-handed 310
Helix 7
AA7
A
443 456Right-handed alpha
Helix 8
AA8
B
1952 1970Right-handed alpha
Helix 9
AA9
C
322 331Right-handed alpha
Helix 10
AB1
C
359 366Right-handed alpha
Helix 11
AB2
C
387 396Right-handed alpha
Helix 12
AB3
C
401 407Right-handed alpha
Helix 13
AB4
C
408 411Right-handed 310
Helix 14
AB5
C
430 434Right-handed 310
Helix 15
AB6
C
443 456Right-handed alpha
Helix 16
AB7
D
1952 1970Right-handed alpha
Helix 17
AB8
E
322 329Right-handed alpha
Helix 18
AB9
E
359 366Right-handed alpha
Helix 19
AC1
E
387 396Right-handed alpha
Helix 20
AC2
E
401 407Right-handed alpha
Helix 21
AC3
E
408 411Right-handed 310
Helix 22
AC4
E
430 434Right-handed 310
Helix 23
AC5
E
443 456Right-handed alpha
Helix 24
AC6
F
1954 1969Right-handed alpha
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There are 9 sheets in PDB entry 7CO1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
290 292anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
436 442anti-parallel
Strand 4
A
413 417anti-parallel
Strand 5
A
355 358anti-parallel
Strand 6
A
374 376anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 299first strand
Strand 2
A
336 341anti-parallel
Strand 3
A
344 349anti-parallel
Strand 4
A
381 386anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
284 285first strand
Strand 2
C
275 281anti-parallel
Strand 3
C
290 292anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
284 285first strand
Strand 2
C
275 281anti-parallel
Strand 3
C
437 442anti-parallel
Strand 4
C
413 417anti-parallel
Strand 5
C
355 358anti-parallel
Strand 6
C
374 376anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
296 299first strand
Strand 2
C
336 341anti-parallel
Strand 3
C
344 349anti-parallel
Strand 4
C
381 386anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
284 285first strand
Strand 2
E
275 281anti-parallel
Strand 3
E
290 292anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
284 285first strand
Strand 2
E
275 281anti-parallel
Strand 3
E
436 442anti-parallel
Strand 4
E
413 417anti-parallel
Strand 5
E
355 358anti-parallel
Strand 6
E
374 376anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
296 299first strand
Strand 2
E
336 341anti-parallel
Strand 3
E
344 349anti-parallel
Strand 4
E
381 386anti-parallel
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