Analysis of interatomic Contacts of Structural Units in PDB entry:
7CO2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CO2 entry

There are 2 chains in PDB entry 7CO2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 TRP 1PHE 3
A
 PRO 53GLU 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 7CO2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 63Right-handed alpha
Helix 2
AA2
A
122 126Right-handed alpha
Helix 3
AA3
A
171 175Right-handed 310
Helix 4
AA4
A
186 190Right-handed 310
Helix 5
AA5
A
261 275Right-handed alpha
Helix 6
AA6
A
337 347Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 7CO2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 73first strand
Strand 2
A
104 111anti-parallel
Strand 3
A
117 121anti-parallel
Strand 4
A
154 158anti-parallel
Strand 5
A
140 149anti-parallel
Strand 6
A
128 134anti-parallel
Strand 7
A
66 73anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 185first strand
Strand 2
A
193 204anti-parallel
Strand 3
A
215 218anti-parallel
Strand 4
A
256 260anti-parallel
Strand 5
A
238 245anti-parallel
Strand 6
A
230 233anti-parallel
Strand 7
A
180 185anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 281first strand
Strand 2
A
372 373anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
305 307anti-parallel
Strand 3
A
326 330anti-parallel
Strand 4
A
333 334anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
305 307anti-parallel
Strand 3
A
326 330anti-parallel
Strand 4
A
353 360anti-parallel
Strand 5
A
363 370anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il