Analysis of interatomic Contacts of Structural Units in PDB entry:
7COX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7COX entry

There are 2 chains in PDB entry 7COX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4GLN 379
F
 PRO 4GLN 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7COX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 36Right-handed alpha
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
96 107Right-handed alpha
Helix 4
AA4
A
119 126Right-handed alpha
Helix 5
AA5
A
156 161Right-handed alpha
Helix 6
AA6
A
164 172Right-handed alpha
Helix 7
AA7
A
190 203Right-handed alpha
Helix 8
AA8
A
213 222Right-handed alpha
Helix 9
AA9
A
251 262Right-handed alpha
Helix 10
AB1
A
269 280Right-handed alpha
Helix 11
AB2
A
290 293Right-handed 310
Helix 12
AB3
A
294 310Right-handed alpha
Helix 13
AB4
A
311 326Right-handed alpha
Helix 14
AB5
A
332 346Right-handed alpha
Helix 15
AB6
A
346 364Right-handed alpha
Helix 16
AB7
A
366 378Right-handed alpha
Helix 17
AB8
F
19 36Right-handed alpha
Helix 18
AB9
F
45 53Right-handed alpha
Helix 19
AC1
F
96 107Right-handed alpha
Helix 20
AC2
F
119 126Right-handed alpha
Helix 21
AC3
F
156 161Right-handed alpha
Helix 22
AC4
F
164 172Right-handed alpha
Helix 23
AC5
F
190 203Right-handed alpha
Helix 24
AC6
F
213 222Right-handed alpha
Helix 25
AC7
F
251 262Right-handed alpha
Helix 26
AC8
F
269 280Right-handed alpha
Helix 27
AC9
F
290 293Right-handed 310
Helix 28
AD1
F
294 308Right-handed alpha
Helix 29
AD2
F
311 326Right-handed alpha
Helix 30
AD3
F
332 346Right-handed alpha
Helix 31
AD4
F
346 363Right-handed alpha
Helix 32
AD5
F
366 378Right-handed alpha
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There are 5 sheets in PDB entry 7COX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
66 70anti-parallel
Strand 3
A
38 43parallel
Strand 4
A
7 12parallel
Strand 5
A
86 90parallel
Strand 6
A
109 114parallel
Strand 7
A
135 141parallel
Strand 8
A
129 132anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 239first strand
Strand 2
A
242 246anti-parallel
Strand 3
A
206 210parallel
Strand 4
A
181 184parallel
Strand 5
A
264 268parallel
Strand 6
A
283 286parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
61 63first strand
Strand 2
F
66 72anti-parallel
Strand 3
F
75 76anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
61 63first strand
Strand 2
F
66 72anti-parallel
Strand 3
F
38 43parallel
Strand 4
F
7 12parallel
Strand 5
F
86 90parallel
Strand 6
F
109 113parallel
Strand 7
F
135 140parallel
Strand 8
F
129 132anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
236 239first strand
Strand 2
F
242 246anti-parallel
Strand 3
F
206 210parallel
Strand 4
F
181 184parallel
Strand 5
F
264 267parallel
Strand 6
F
283 285parallel
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