Analysis of interatomic Contacts of Structural Units in PDB entry:
7CP6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CP6 entry

There are 2 chains in PDB entry 7CP6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5TYR 443
B
 ALA 6PRO 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7CP6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
61 70Right-handed alpha
Helix 3
AA3
A
73 80Right-handed alpha
Helix 4
AA4
A
81 83Right-handed 310
Helix 5
AA5
A
115 129Right-handed alpha
Helix 6
AA6
A
172 180Right-handed alpha
Helix 7
AA7
A
201 205Right-handed 310
Helix 8
AA8
A
208 213Right-handed 310
Helix 9
AA9
A
264 273Right-handed alpha
Helix 10
AB1
A
278 286Right-handed alpha
Helix 11
AB2
A
287 288Right-handed 310
Helix 12
AB3
A
289 291Right-handed 310
Helix 13
AB4
A
318 321Right-handed 310
Helix 14
AB5
A
330 350Right-handed alpha
Helix 15
AB6
A
353 385Right-handed alpha
Helix 16
AB7
A
387 394Right-handed alpha
Helix 17
AB8
A
403 408Right-handed alpha
Helix 18
AB9
A
410 427Right-handed alpha
Helix 19
AC1
B
24 37Right-handed alpha
Helix 20
AC2
B
61 70Right-handed alpha
Helix 21
AC3
B
72 80Right-handed alpha
Helix 22
AC4
B
81 83Right-handed 310
Helix 23
AC5
B
115 129Right-handed alpha
Helix 24
AC6
B
172 180Right-handed alpha
Helix 25
AC7
B
201 205Right-handed 310
Helix 26
AC8
B
208 213Right-handed 310
Helix 27
AC9
B
264 272Right-handed alpha
Helix 28
AD1
B
278 286Right-handed alpha
Helix 29
AD2
B
287 288Right-handed 310
Helix 30
AD3
B
289 291Right-handed 310
Helix 31
AD4
B
318 321Right-handed 310
Helix 32
AD5
B
330 350Right-handed alpha
Helix 33
AD6
B
353 385Right-handed alpha
Helix 34
AD7
B
387 394Right-handed alpha
Helix 35
AD8
B
395 398Right-handed 310
Helix 36
AD9
B
403 408Right-handed alpha
Helix 37
AE1
B
410 427Right-handed alpha
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There are 8 sheets in PDB entry 7CP6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
40 44parallel
Strand 3
A
17 21parallel
Strand 4
A
163 166parallel
Strand 5
A
314 316parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
111 114anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 103first strand
Strand 2
A
88 93anti-parallel
Strand 3
A
221 226parallel
Strand 4
A
229 236anti-parallel
Strand 5
A
241 248anti-parallel
Strand 6
A
191 198anti-parallel
Strand 7
A
293 297anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 145first strand
Strand 2
A
148 153anti-parallel
Strand 3
A
157 161anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 134first strand
Strand 2
B
40 44parallel
Strand 3
B
17 21parallel
Strand 4
B
163 166parallel
Strand 5
B
314 316parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
111 114anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 103first strand
Strand 2
B
88 93anti-parallel
Strand 3
B
221 226parallel
Strand 4
B
229 236anti-parallel
Strand 5
B
241 248anti-parallel
Strand 6
B
190 198anti-parallel
Strand 7
B
293 298anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 144first strand
Strand 2
B
149 153anti-parallel
Strand 3
B
157 161anti-parallel
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