Analysis of interatomic Contacts of Structural Units in PDB entry:
7CSG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CSG entry

There are 2 chains in PDB entry 7CSG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 9VAL 317
B
 LYS 9VAL 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7CSG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 33Right-handed alpha
Helix 2
AA2
A
41 46Right-handed 310
Helix 3
AA3
A
47 60Right-handed alpha
Helix 4
AA4
A
71 80Right-handed alpha
Helix 5
AA5
A
99 113Right-handed alpha
Helix 6
AA6
A
145 155Right-handed alpha
Helix 7
AA7
A
167 171Right-handed alpha
Helix 8
AA8
A
201 213Right-handed alpha
Helix 9
AA9
A
214 219Right-handed 310
Helix 10
AB1
A
227 229Right-handed 310
Helix 11
AB2
A
234 246Right-handed alpha
Helix 12
AB3
A
255 261Right-handed alpha
Helix 13
AB4
A
273 282Right-handed alpha
Helix 14
AB5
A
292 295Right-handed 310
Helix 15
AB6
A
296 301Right-handed alpha
Helix 16
AB7
A
308 315Right-handed alpha
Helix 17
AB8
B
19 33Right-handed alpha
Helix 18
AB9
B
41 45Right-handed 310
Helix 19
AC1
B
47 60Right-handed alpha
Helix 20
AC2
B
71 80Right-handed alpha
Helix 21
AC3
B
100 113Right-handed alpha
Helix 22
AC4
B
141 145Right-handed alpha
Helix 23
AC5
B
145 155Right-handed alpha
Helix 24
AC6
B
167 171Right-handed alpha
Helix 25
AC7
B
201 213Right-handed alpha
Helix 26
AC8
B
215 219Right-handed 310
Helix 27
AC9
B
227 229Right-handed 310
Helix 28
AD1
B
234 246Right-handed alpha
Helix 29
AD2
B
255 263Right-handed alpha
Helix 30
AD3
B
274 282Right-handed alpha
Helix 31
AD4
B
292 295Right-handed 310
Helix 32
AD5
B
296 301Right-handed alpha
Helix 33
AD6
B
308 315Right-handed alpha
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There are 8 sheets in PDB entry 7CSG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
35 40parallel
Strand 3
A
11 15parallel
Strand 4
A
84 87parallel
Strand 5
A
117 120parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 162first strand
Strand 2
A
221 224parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 166first strand
Strand 2
A
196 200parallel
Strand 3
A
231 233anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 190first strand
Strand 2
A
250 254parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 66first strand
Strand 2
B
35 40parallel
Strand 3
B
11 15parallel
Strand 4
B
84 87parallel
Strand 5
B
117 120parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 162first strand
Strand 2
B
221 224parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 166first strand
Strand 2
B
196 200parallel
Strand 3
B
231 233anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 190first strand
Strand 2
B
250 254parallel
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