Analysis of interatomic Contacts of Structural Units in PDB entry:
7CSP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CSP entry

There are 2 chains in PDB entry 7CSP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 214VAL 709
B
 PRO 217VAL 709
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7CSP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
219 223Right-handed 310
Helix 2
AA2
A
225 229Right-handed 310
Helix 3
AA3
A
272 277Right-handed alpha
Helix 4
AA4
A
283 314Right-handed alpha
Helix 5
AA5
A
317 322Right-handed alpha
Helix 6
AA6
A
325 334Right-handed alpha
Helix 7
AA7
A
335 357Right-handed alpha
Helix 8
AA8
A
363 374Right-handed alpha
Helix 9
AA9
A
375 384Right-handed alpha
Helix 10
AB1
A
384 399Right-handed alpha
Helix 11
AB2
A
399 412Right-handed alpha
Helix 12
AB3
A
419 425Right-handed alpha
Helix 13
AB4
A
425 444Right-handed alpha
Helix 14
AB5
A
448 488Right-handed alpha
Helix 15
AB6
A
518 522Right-handed 310
Helix 16
AB7
A
608 620Right-handed alpha
Helix 17
AB8
A
624 631Right-handed alpha
Helix 18
AB9
A
632 635Right-handed 310
Helix 19
AC1
A
693 708Right-handed alpha
Helix 20
AC2
B
219 223Right-handed 310
Helix 21
AC3
B
266 269Right-handed 310
Helix 22
AC4
B
270 277Right-handed alpha
Helix 23
AC5
B
283 314Right-handed alpha
Helix 24
AC6
B
317 322Right-handed alpha
Helix 25
AC7
B
325 334Right-handed alpha
Helix 26
AC8
B
335 357Right-handed alpha
Helix 27
AC9
B
363 374Right-handed alpha
Helix 28
AD1
B
375 399Right-handed alpha
Helix 29
AD2
B
399 412Right-handed alpha
Helix 30
AD3
B
420 425Right-handed alpha
Helix 31
AD4
B
425 444Right-handed alpha
Helix 32
AD5
B
448 488Right-handed alpha
Helix 33
AD6
B
491 494Right-handed 310
Helix 34
AD7
B
608 620Right-handed alpha
Helix 35
AD8
B
620 628Right-handed alpha
Helix 36
AD9
B
629 635Right-handed 310
Helix 37
AE1
B
693 708Right-handed alpha
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There are 4 sheets in PDB entry 7CSP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
549 557parallel
Strand 3
A
538 546anti-parallel
Strand 4
A
529 535anti-parallel
Strand 5
A
506 514anti-parallel
Strand 6
A
600 605anti-parallel
Strand 7
A
586 591anti-parallel
Strand 8
A
561 565anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 684first strand
Strand 2
A
669 674anti-parallel
Strand 3
A
659 666anti-parallel
Strand 4
A
637 640anti-parallel
Strand 5
A
688 691anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
489 490first strand
Strand 2
B
550 557parallel
Strand 3
B
538 544anti-parallel
Strand 4
B
529 535anti-parallel
Strand 5
B
506 514anti-parallel
Strand 6
B
600 605anti-parallel
Strand 7
B
586 591anti-parallel
Strand 8
B
561 565anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
680 684first strand
Strand 2
B
669 674anti-parallel
Strand 3
B
659 666anti-parallel
Strand 4
B
637 640anti-parallel
Strand 5
B
688 690anti-parallel
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