Analysis of interatomic Contacts of Structural Units in PDB entry:
7CSQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CSQ entry

There are 2 chains in PDB entry 7CSQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 330VAL 427
B
ALA 199ALA 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7CSQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
335 339Right-handed 310
Helix 2
AA2
A
340 351Right-handed alpha
Helix 3
AA3
A
358 367Right-handed alpha
Helix 4
AA4
A
369 377Right-handed alpha
Helix 5
AA5
A
381 391Right-handed alpha
Helix 6
AA6
A
397 408Right-handed alpha
Helix 7
AA7
A
410 419Right-handed alpha
Helix 8
AA8
B
215 227Right-handed alpha
Helix 9
AA9
B
229 241Right-handed alpha
Helix 10
AB1
B
242 245Right-handed 310
Helix 11
AB2
B
247 256Right-handed alpha
Helix 12
AB3
B
260 276Right-handed alpha
Helix 13
AB4
B
281 292Right-handed alpha
Helix 14
AB5
B
294 301Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7CSQ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
201 204first strand
Strand 2
B
207 210anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il