Analysis of interatomic Contacts of Structural Units in PDB entry:
7CTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CTF entry

There are 5 chains in PDB entry 7CTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 760GLU 861
B
 GLN 269GLU 575
C
 GLY 9TRP 709
D
 THR 14SER 432
E
 LEU 4ASP 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 87 helices in PDB entry 7CTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
761 769Right-handed alpha
Helix 2
AA2
A
771 789Right-handed alpha
Helix 3
AA3
A
794 809Right-handed alpha
Helix 4
AA4
A
815 829Right-handed alpha
Helix 5
AA5
A
850 860Right-handed alpha
Helix 6
AA6
B
270 275Right-handed alpha
Helix 7
AA7
B
284 294Right-handed alpha
Helix 8
AA8
B
297 307Right-handed alpha
Helix 9
AA9
B
319 331Right-handed alpha
Helix 10
AB1
B
347 358Right-handed alpha
Helix 11
AB2
B
368 383Right-handed alpha
Helix 12
AB3
B
402 414Right-handed alpha
Helix 13
AB4
B
428 432Right-handed 310
Helix 14
AB5
B
434 439Right-handed alpha
Helix 15
AB6
B
454 461Right-handed alpha
Helix 16
AB7
B
473 483Right-handed alpha
Helix 17
AB8
B
485 501Right-handed alpha
Helix 18
AB9
B
512 522Right-handed alpha
Helix 19
AC1
B
528 540Right-handed alpha
Helix 20
AC2
B
566 573Right-handed alpha
Helix 21
AC3
C
39 66Right-handed alpha
Helix 22
AC4
C
66 83Right-handed alpha
Helix 23
AC5
C
113 129Right-handed alpha
Helix 24
AC6
C
143 163Right-handed alpha
Helix 25
AC7
C
196 207Right-handed alpha
Helix 26
AC8
C
226 240Right-handed alpha
Helix 27
AC9
C
257 263Right-handed alpha
Helix 28
AD1
C
264 270Right-handed alpha
Helix 29
AD2
C
281 293Right-handed alpha
Helix 30
AD3
C
303 316Right-handed alpha
Helix 31
AD4
C
321 339Right-handed alpha
Helix 32
AD5
C
347 355Right-handed alpha
Helix 33
AD6
C
359 369Right-handed alpha
Helix 34
AD7
C
369 378Right-handed alpha
Helix 35
AD8
C
380 388Right-handed alpha
Helix 36
AD9
C
390 425Right-handed alpha
Helix 37
AE1
C
434 442Right-handed alpha
Helix 38
AE2
C
450 460Right-handed alpha
Helix 39
AE3
C
465 482Right-handed alpha
Helix 40
AE4
C
482 487Right-handed alpha
Helix 41
AE5
C
492 501Right-handed alpha
Helix 42
AE6
C
549 566Right-handed alpha
Helix 43
AE7
C
569 574Right-handed alpha
Helix 44
AE8
C
584 593Right-handed alpha
Helix 45
AE9
C
595 606Right-handed alpha
Helix 46
AF1
C
629 638Right-handed alpha
Helix 47
AF2
C
645 663Right-handed alpha
Helix 48
AF3
C
670 691Right-handed alpha
Helix 49
AF4
D
15 30Right-handed alpha
Helix 50
AF5
D
40 57Right-handed alpha
Helix 51
AF6
D
72 87Right-handed alpha
Helix 52
AF7
D
106 118Right-handed alpha
Helix 53
AF8
D
119 123Right-handed 310
Helix 54
AF9
D
131 146Right-handed alpha
Helix 55
AG1
D
160 165Right-handed alpha
Helix 56
AG2
D
170 183Right-handed alpha
Helix 57
AG3
D
197 202Right-handed alpha
Helix 58
AG4
D
203 208Right-handed alpha
Helix 59
AG5
D
222 235Right-handed alpha
Helix 60
AG6
D
242 259Right-handed alpha
Helix 61
AG7
D
259 273Right-handed alpha
Helix 62
AG8
D
277 289Right-handed alpha
Helix 63
AG9
D
298 309Right-handed alpha
Helix 64
AH1
D
314 320Right-handed alpha
Helix 65
AH2
D
322 337Right-handed alpha
Helix 66
AH3
D
345 360Right-handed alpha
Helix 67
AH4
D
368 380Right-handed alpha
Helix 68
AH5
D
407 417Right-handed alpha
Helix 69
AH6
D
422 432Right-handed alpha
Helix 70
AH7
E
11 23Right-handed alpha
Helix 71
AH8
E
44 55Right-handed alpha
Helix 72
AH9
E
68 81Right-handed alpha
Helix 73
AI1
E
98 110Right-handed alpha
Helix 74
AI2
E
127 132Right-handed alpha
Helix 75
AI3
E
136 143Right-handed alpha
Helix 76
AI4
E
143 148Right-handed alpha
Helix 77
AI5
E
161 166Right-handed alpha
Helix 78
AI6
E
183 191Right-handed alpha
Helix 79
AI7
E
200 216Right-handed alpha
Helix 80
AI8
E
221 244Right-handed alpha
Helix 81
AI9
E
250 268Right-handed alpha
Helix 82
AJ1
E
303 319Right-handed alpha
Helix 83
AJ2
E
323 328Right-handed alpha
Helix 84
AJ3
E
358 370Right-handed alpha
Helix 85
AJ4
E
377 390Right-handed alpha
Helix 86
AJ5
E
412 422Right-handed alpha
Helix 87
AJ6
E
427 432Right-handed alpha
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There are 11 sheets in PDB entry 7CTF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
832 833first strand
Strand 2
A
846 847anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 424first strand
Strand 2
B
310 314parallel
Strand 3
B
443 447parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 392first strand
Strand 2
B
336 339parallel
Strand 3
C
11 13anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 549first strand
Strand 2
B
555 558anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 102first strand
Strand 2
C
272 273parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
105 106first strand
Strand 2
C
249 252parallel
Strand 3
C
216 219parallel
Strand 4
C
133 136parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
695 696first strand
Strand 2
C
704 705anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
64 66first strand
Strand 2
D
189 193parallel
Strand 3
D
154 158parallel
Strand 4
D
95 99parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
385 387first strand
Strand 2
D
402 404anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 62first strand
Strand 2
E
120 125parallel
Strand 3
E
152 157parallel
Strand 4
E
32 36parallel
Strand 5
E
175 178parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
393 395first strand
Strand 2
E
407 409anti-parallel
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