Analysis of interatomic Contacts of Structural Units in PDB entry:
7CTP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CTP entry

There is 1 chain in PDB entry 7CTP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ARG 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7CTP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 9Right-handed alpha
Helix 2
AA2
A
10 50Right-handed alpha
Helix 3
AA3
A
103 109Right-handed alpha
Helix 4
AA4
A
127 136Right-handed alpha
Helix 5
AA5
A
176 196Right-handed alpha
Helix 6
AA6
A
204 220Right-handed alpha
Helix 7
AA7
A
232 254Right-handed alpha
Helix 8
AA8
A
255 257Right-handed 310
Helix 9
AA9
A
260 339Right-handed alpha
Helix 10
AB1
A
342 380Right-handed alpha
Helix 11
AB2
A
384 393Right-handed alpha
Helix 12
AB3
A
394 398Right-handed 310
Helix 13
AB4
A
402 407Right-handed alpha
Helix 14
AB5
A
408 412Right-handed 310
Helix 15
AB6
A
422 457Right-handed alpha
Helix 16
AB7
A
464 513Right-handed alpha
Helix 17
AB8
A
515 523Right-handed 310
Helix 18
AB9
A
524 528Right-handed 310
Helix 19
AC1
A
532 557Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7CTP.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
98 101anti-parallel
Strand 3
A
85 92anti-parallel
Strand 4
A
71 78anti-parallel
Strand 5
A
170 174anti-parallel
Strand 6
A
158 163anti-parallel
Strand 7
A
123 125anti-parallel
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