Analysis of interatomic Contacts of Structural Units in PDB entry:
7CTY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CTY entry

There are 2 chains in PDB entry 7CTY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4ASP 605
B
 PHE 9MET 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 7CTY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed alpha
Helix 2
AA2
A
33 37Right-handed 310
Helix 3
AA3
A
52 64Right-handed alpha
Helix 4
AA4
A
67 69Right-handed 310
Helix 5
AA5
A
70 80Right-handed alpha
Helix 6
AA6
A
106 112Right-handed alpha
Helix 7
AA7
A
132 136Right-handed 310
Helix 8
AA8
A
148 154Right-handed alpha
Helix 9
AA9
A
166 175Right-handed alpha
Helix 10
AB1
A
287 294Right-handed alpha
Helix 11
AB2
A
308 311Right-handed 310
Helix 12
AB3
A
312 318Right-handed alpha
Helix 13
AB4
A
325 339Right-handed alpha
Helix 14
AB5
A
376 389Right-handed alpha
Helix 15
AB6
A
392 398Right-handed alpha
Helix 16
AB7
A
405 408Right-handed 310
Helix 17
AB8
A
409 416Right-handed alpha
Helix 18
AB9
A
429 437Right-handed alpha
Helix 19
AC1
A
454 466Right-handed alpha
Helix 20
AC2
A
478 485Right-handed 310
Helix 21
AC3
A
516 536Right-handed alpha
Helix 22
AC4
A
556 565Right-handed alpha
Helix 23
AC5
A
582 586Right-handed 310
Helix 24
AC6
A
587 589Right-handed 310
Helix 25
AC7
B
33 35Right-handed 310
Helix 26
AC8
B
51 63Right-handed alpha
Helix 27
AC9
B
67 71Right-handed 310
Helix 28
AD1
B
105 112Right-handed alpha
Helix 29
AD2
B
132 136Right-handed 310
Helix 30
AD3
B
146 154Right-handed alpha
Helix 31
AD4
B
166 176Right-handed alpha
Helix 32
AD5
B
287 294Right-handed alpha
Helix 33
AD6
B
309 311Right-handed 310
Helix 34
AD7
B
312 318Right-handed alpha
Helix 35
AD8
B
325 339Right-handed alpha
Helix 36
AD9
B
376 388Right-handed alpha
Helix 37
AE1
B
392 398Right-handed alpha
Helix 38
AE2
B
404 408Right-handed 310
Helix 39
AE3
B
409 416Right-handed alpha
Helix 40
AE4
B
429 437Right-handed alpha
Helix 41
AE5
B
454 466Right-handed alpha
Helix 42
AE6
B
481 485Right-handed 310
Helix 43
AE7
B
516 535Right-handed alpha
Helix 44
AE8
B
556 565Right-handed alpha
Helix 45
AE9
B
587 589Right-handed 310
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There are 8 sheets in PDB entry 7CTY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
123 127parallel
Strand 3
A
101 105parallel
Strand 4
A
161 163parallel
Strand 5
A
11 20parallel
Strand 6
A
181 191parallel
Strand 7
A
219 228anti-parallel
Strand 8
A
205 216anti-parallel
Strand 9
A
320 321parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
195 196anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 342first strand
Strand 2
A
350 361anti-parallel
Strand 3
A
539 553anti-parallel
Strand 4
A
502 513parallel
Strand 5
A
491 499anti-parallel
Strand 6
A
473 475anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 576first strand
Strand 2
A
591 594anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 39first strand
Strand 2
B
11 20anti-parallel
Strand 3
B
182 191parallel
Strand 4
B
219 227anti-parallel
Strand 5
B
214 216anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
123 127parallel
Strand 3
B
101 104parallel
Strand 4
B
161 163parallel
Strand 5
B
11 20parallel
Strand 6
B
182 191parallel
Strand 7
B
219 227anti-parallel
Strand 8
B
206 210anti-parallel
Strand 9
B
320 321parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
340 342first strand
Strand 2
B
350 361anti-parallel
Strand 3
B
539 553anti-parallel
Strand 4
B
502 513parallel
Strand 5
B
491 499anti-parallel
Strand 6
B
473 475anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
573 576first strand
Strand 2
B
591 594anti-parallel
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