Analysis of interatomic Contacts of Structural Units in PDB entry:
7CU0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7CU0 entry

There are 2 chains in PDB entry 7CU0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 531
B	ASP 2	SER 531

There are 42 helices in PDB entry 7CU0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	28	Right-handed alpha
Helix 2	AA2	A	54	59	Right-handed alpha
Helix 3	AA3	A	59	64	Right-handed alpha
Helix 4	AA4	A	66	73	Right-handed alpha
Helix 5	AA5	A	123	133	Right-handed alpha
Helix 6	AA6	A	139	145	Right-handed alpha
Helix 7	AA7	A	145	153	Right-handed alpha
Helix 8	AA8	A	173	189	Right-handed alpha
Helix 9	AA9	A	264	269	Right-handed alpha
Helix 10	AB1	A	305	318	Right-handed alpha
Helix 11	AB2	A	320	324	Right-handed 310
Helix 12	AB3	A	348	350	Right-handed 310
Helix 13	AB4	A	360	375	Right-handed alpha
Helix 14	AB5	A	382	410	Right-handed alpha
Helix 15	AB6	A	416	423	Right-handed alpha
Helix 16	AB7	A	428	440	Right-handed alpha
Helix 17	AB8	A	450	457	Right-handed alpha
Helix 18	AB9	A	457	463	Right-handed alpha
Helix 19	AC1	A	467	479	Right-handed alpha
Helix 20	AC2	A	486	491	Right-handed 310
Helix 21	AC3	A	492	517	Right-handed alpha
Helix 22	AC4	A	519	529	Right-handed alpha
Helix 23	AC5	B	13	28	Right-handed alpha
Helix 24	AC6	B	54	59	Right-handed alpha
Helix 25	AC7	B	66	74	Right-handed alpha
Helix 26	AC8	B	123	133	Right-handed alpha
Helix 27	AC9	B	139	145	Right-handed alpha
Helix 28	AD1	B	146	154	Right-handed alpha
Helix 29	AD2	B	173	190	Right-handed alpha
Helix 30	AD3	B	264	269	Right-handed alpha
Helix 31	AD4	B	305	318	Right-handed alpha
Helix 32	AD5	B	348	350	Right-handed 310
Helix 33	AD6	B	360	375	Right-handed alpha
Helix 34	AD7	B	382	410	Right-handed alpha
Helix 35	AD8	B	416	423	Right-handed alpha
Helix 36	AD9	B	428	440	Right-handed alpha
Helix 37	AE1	B	450	455	Right-handed alpha
Helix 38	AE2	B	457	463	Right-handed alpha
Helix 39	AE3	B	467	479	Right-handed alpha
Helix 40	AE4	B	486	491	Right-handed 310
Helix 41	AE5	B	492	517	Right-handed alpha
Helix 42	AE6	B	519	529	Right-handed alpha

There are 12 sheets in PDB entry 7CU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	195	first strand
Strand 2	A	33	38	parallel
Strand 3	A	7	11	parallel
Strand 4	A	224	227	parallel
Strand 5	A	344	346	parallel
Strand 6	A	340	341	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	50	first strand
Strand 2	A	169	172	anti-parallel
Strand 3	A	77	79	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	111	first strand
Strand 2	A	81	85	anti-parallel
Strand 3	A	274	278	parallel
Strand 4	A	282	289	anti-parallel
Strand 5	A	292	299	anti-parallel
Strand 6	A	255	262	anti-parallel
Strand 7	A	327	330	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	118	first strand
Strand 2	A	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	203	first strand
Strand 2	A	209	214	anti-parallel
Strand 3	A	219	221	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	246	first strand
Strand 2	A	334	336	anti-parallel
Strand 3	A	352	353	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	33	37	parallel
Strand 3	B	7	11	parallel
Strand 4	B	224	227	parallel
Strand 5	B	344	346	parallel
Strand 6	B	340	341	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	50	first strand
Strand 2	B	169	172	anti-parallel
Strand 3	B	77	79	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	111	first strand
Strand 2	B	81	85	anti-parallel
Strand 3	B	274	278	parallel
Strand 4	B	282	289	anti-parallel
Strand 5	B	292	299	anti-parallel
Strand 6	B	255	262	anti-parallel
Strand 7	B	327	330	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	118	first strand
Strand 2	B	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	203	first strand
Strand 2	B	209	214	anti-parallel
Strand 3	B	219	221	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	246	first strand
Strand 2	B	334	336	anti-parallel
Strand 3	B	352	353	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7CU0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7CU0