Analysis of interatomic Contacts of Structural Units in PDB entry:
7CUD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CUD entry

There is 1 chain in PDB entry 7CUD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 174ALA 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 7CUD. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
200 209Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7CUD.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
183 185first strand
Strand 2
A
188 191anti-parallel
Strand 3
A
240 244anti-parallel
Strand 4
A
233 237anti-parallel
Strand 5
A
218 222parallel
Strand 6
A
210 215anti-parallel
Strand 7
A
251 259anti-parallel
Strand 8
A
265 272anti-parallel
Strand 9
A
275 283anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il