Analysis of interatomic Contacts of Structural Units in PDB entry:
7CUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CUJ entry

There are 4 chains in PDB entry 7CUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 132GLU 439
C
 LEU 429PHE 466
B
 SER 132GLU 439
D
 ILE 427ARG 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7CUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
141 155Right-handed alpha
Helix 2
AA2
A
155 164Right-handed alpha
Helix 3
AA3
A
168 188Right-handed alpha
Helix 4
AA4
A
189 193Right-handed 310
Helix 5
AA5
A
218 222Right-handed 310
Helix 6
AA6
A
223 235Right-handed alpha
Helix 7
AA7
A
250 264Right-handed alpha
Helix 8
AA8
A
291 296Right-handed alpha
Helix 9
AA9
A
297 300Right-handed 310
Helix 10
AB1
A
312 323Right-handed alpha
Helix 11
AB2
A
338 346Right-handed alpha
Helix 12
AB3
A
353 366Right-handed alpha
Helix 13
AB4
A
396 417Right-handed alpha
Helix 14
AB5
A
420 424Right-handed 310
Helix 15
AB6
A
432 436Right-handed 310
Helix 16
AB7
C
440 466Right-handed alpha
Helix 17
AB8
B
141 155Right-handed alpha
Helix 18
AB9
B
155 165Right-handed alpha
Helix 19
AC1
B
168 188Right-handed alpha
Helix 20
AC2
B
189 193Right-handed 310
Helix 21
AC3
B
223 237Right-handed alpha
Helix 22
AC4
B
250 262Right-handed alpha
Helix 23
AC5
B
291 299Right-handed alpha
Helix 24
AC6
B
312 323Right-handed alpha
Helix 25
AC7
B
338 347Right-handed alpha
Helix 26
AC8
B
348 350Right-handed 310
Helix 27
AC9
B
353 366Right-handed alpha
Helix 28
AD1
B
397 417Right-handed alpha
Helix 29
AD2
B
420 424Right-handed 310
Helix 30
AD3
B
432 436Right-handed 310
Helix 31
AD4
D
440 462Right-handed alpha
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There are 2 sheets in PDB entry 7CUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 138first strand
Strand 2
A
330 335parallel
Strand 3
A
306 310parallel
Strand 4
A
243 248parallel
Strand 5
A
284 288parallel
Strand 6
A
268 270parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 138first strand
Strand 2
B
330 335parallel
Strand 3
B
306 310parallel
Strand 4
B
243 248parallel
Strand 5
B
284 288parallel
Strand 6
B
268 270parallel
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