Analysis of interatomic Contacts of Structural Units in PDB entry:
7CUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CUQ entry

There are 4 chains in PDB entry 7CUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 659
B
 CYS 1ALA 259
C
 ALA 21MET 204
D
 GLY 13HIS 109
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 7CUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 39Right-handed alpha
Helix 2
AA2
A
40 45Right-handed alpha
Helix 3
AA3
A
53 75Right-handed alpha
Helix 4
AA4
A
75 87Right-handed alpha
Helix 5
AA5
A
95 113Right-handed alpha
Helix 6
AA6
A
114 131Right-handed alpha
Helix 7
AA7
A
138 162Right-handed alpha
Helix 8
AA8
A
185 215Right-handed alpha
Helix 9
AA9
A
226 259Right-handed alpha
Helix 10
AB1
A
272 282Right-handed alpha
Helix 11
AB2
A
282 305Right-handed alpha
Helix 12
AB3
A
312 327Right-handed alpha
Helix 13
AB4
A
328 329Right-handed 310
Helix 14
AB5
A
330 339Right-handed 310
Helix 15
AB6
A
341 355Right-handed alpha
Helix 16
AB7
A
355 370Right-handed alpha
Helix 17
AB8
A
378 403Right-handed alpha
Helix 18
AB9
A
403 408Right-handed alpha
Helix 19
AC1
A
413 421Right-handed alpha
Helix 20
AC2
A
427 439Right-handed alpha
Helix 21
AC3
A
439 445Right-handed alpha
Helix 22
AC4
A
449 468Right-handed alpha
Helix 23
AC5
A
468 477Right-handed alpha
Helix 24
AC6
A
488 492Right-handed 310
Helix 25
AC7
A
494 522Right-handed alpha
Helix 26
AC8
A
538 543Right-handed 310
Helix 27
AC9
A
562 571Right-handed alpha
Helix 28
AD1
A
592 608Right-handed alpha
Helix 29
AD2
A
610 628Right-handed alpha
Helix 30
AD3
A
639 657Right-handed alpha
Helix 31
AD4
B
10 45Right-handed alpha
Helix 32
AD5
B
61 82Right-handed alpha
Helix 33
AD6
B
190 193Right-handed 310
Helix 34
AD7
B
203 215Right-handed alpha
Helix 35
AD8
B
223 231Right-handed alpha
Helix 36
AD9
B
248 259Right-handed alpha
Helix 37
AE1
C
22 50Right-handed alpha
Helix 38
AE2
C
65 92Right-handed alpha
Helix 39
AE3
C
94 126Right-handed alpha
Helix 40
AE4
C
134 165Right-handed alpha
Helix 41
AE5
C
170 198Right-handed alpha
Helix 42
AE6
C
198 203Right-handed alpha
Helix 43
AE7
D
14 39Right-handed alpha
Helix 44
AE8
D
42 64Right-handed alpha
Helix 45
AE9
D
78 105Right-handed alpha
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There are 4 sheets in PDB entry 7CUQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
583 586first strand
Strand 2
A
635 638anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 172first strand
Strand 2
B
136 143anti-parallel
Strand 3
B
103 109parallel
Strand 4
B
114 118anti-parallel
Strand 5
B
123 126anti-parallel
Strand 6
B
240 242anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 132first strand
Strand 2
B
195 201parallel
Strand 3
B
177 183anti-parallel
Strand 4
B
148 151anti-parallel
Strand 5
B
158 161anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 221first strand
Strand 2
B
244 245parallel
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