Analysis of interatomic Contacts of Structural Units in PDB entry:
7CV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CV6 entry

There is 1 chain in PDB entry 7CV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1VAL 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7CV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
5 14Right-handed alpha
Helix 2
AA2
B
27 33Right-handed alpha
Helix 3
AA3
B
42 47Right-handed alpha
Helix 4
AA4
B
88 107Right-handed alpha
Helix 5
AA5
B
109 115Right-handed alpha
Helix 6
AA6
B
139 146Right-handed alpha
Helix 7
AA7
B
211 218Right-handed 310
Helix 8
AA8
B
251 258Right-handed alpha
Helix 9
AA9
B
259 264Right-handed alpha
Helix 10
AB1
B
278 288Right-handed alpha
Helix 11
AB2
B
288 293Right-handed alpha
Helix 12
AB3
B
367 373Right-handed alpha
Helix 13
AB4
B
403 409Right-handed 310
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There are 5 sheets in PDB entry 7CV6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
23 26anti-parallel
Strand 3
B
352 356parallel
Strand 4
B
301 305parallel
Strand 5
B
324 331anti-parallel
Strand 6
B
270 275anti-parallel
Strand 7
B
229 232parallel
Strand 8
B
383 386parallel
Strand 9
B
395 398parallel
Strand 10
B
205 209parallel
Strand 11
B
180 184anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
23 26anti-parallel
Strand 3
B
352 356parallel
Strand 4
B
301 305parallel
Strand 5
B
324 331anti-parallel
Strand 6
B
296 299anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
411 413anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 155first strand
Strand 2
B
174 176anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 194first strand
Strand 2
B
197 201anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il