Analysis of interatomic Contacts of Structural Units in PDB entry:
7CV7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CV7 entry

There are 2 chains in PDB entry 7CV7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2VAL 414
B
 ALA 2LYS 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7CV7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
27 34Right-handed alpha
Helix 3
AA3
A
42 47Right-handed alpha
Helix 4
AA4
A
87 107Right-handed alpha
Helix 5
AA5
A
108 118Right-handed alpha
Helix 6
AA6
A
130 134Right-handed 310
Helix 7
AA7
A
139 145Right-handed alpha
Helix 8
AA8
A
148 151Right-handed 310
Helix 9
AA9
A
211 219Right-handed 310
Helix 10
AB1
A
251 258Right-handed 310
Helix 11
AB2
A
259 264Right-handed alpha
Helix 12
AB3
A
278 288Right-handed alpha
Helix 13
AB4
A
288 294Right-handed alpha
Helix 14
AB5
A
367 372Right-handed alpha
Helix 15
AB6
A
373 375Right-handed 310
Helix 16
AB7
A
403 411Right-handed 310
Helix 17
AB8
B
3 14Right-handed alpha
Helix 18
AB9
B
27 34Right-handed alpha
Helix 19
AC1
B
42 47Right-handed alpha
Helix 20
AC2
B
84 107Right-handed alpha
Helix 21
AC3
B
108 116Right-handed alpha
Helix 22
AC4
B
139 145Right-handed alpha
Helix 23
AC5
B
148 151Right-handed 310
Helix 24
AC6
B
211 219Right-handed 310
Helix 25
AC7
B
251 256Right-handed alpha
Helix 26
AC8
B
259 264Right-handed alpha
Helix 27
AC9
B
278 288Right-handed alpha
Helix 28
AD1
B
288 294Right-handed alpha
Helix 29
AD2
B
359 363Right-handed 310
Helix 30
AD3
B
367 372Right-handed alpha
Helix 31
AD4
B
373 375Right-handed 310
Helix 32
AD5
B
403 409Right-handed 310
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There are 6 sheets in PDB entry 7CV7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
23 26anti-parallel
Strand 3
A
352 356parallel
Strand 4
A
296 305parallel
Strand 5
A
324 332anti-parallel
Strand 6
A
269 275anti-parallel
Strand 7
A
229 232parallel
Strand 8
A
383 386parallel
Strand 9
A
395 399parallel
Strand 10
A
205 209parallel
Strand 11
A
181 184anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
412 413anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 176first strand
Strand 2
A
153 157anti-parallel
Strand 3
A
190 194anti-parallel
Strand 4
A
197 201anti-parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
23 26anti-parallel
Strand 3
B
352 356parallel
Strand 4
B
296 305parallel
Strand 5
B
324 332anti-parallel
Strand 6
B
269 275anti-parallel
Strand 7
B
229 232parallel
Strand 8
B
383 386parallel
Strand 9
B
395 399parallel
Strand 10
B
205 209parallel
Strand 11
B
181 184anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 41first strand
Strand 2
B
411 412anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 176first strand
Strand 2
B
153 157anti-parallel
Strand 3
B
190 194anti-parallel
Strand 4
B
197 201anti-parallel
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