Analysis of interatomic Contacts of Structural Units in PDB entry:
7CV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CV8 entry

There is 1 chain in PDB entry 7CV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7CV8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 14Right-handed alpha
Helix 2
AA2
A
27 34Right-handed alpha
Helix 3
AA3
A
42 47Right-handed alpha
Helix 4
AA4
A
48 52Right-handed 310
Helix 5
AA5
A
89 107Right-handed alpha
Helix 6
AA6
A
108 113Right-handed alpha
Helix 7
AA7
A
139 144Right-handed alpha
Helix 8
AA8
A
148 151Right-handed 310
Helix 9
AA9
A
211 219Right-handed 310
Helix 10
AB1
A
251 258Right-handed 310
Helix 11
AB2
A
259 264Right-handed alpha
Helix 12
AB3
A
278 288Right-handed alpha
Helix 13
AB4
A
288 294Right-handed alpha
Helix 14
AB5
A
367 372Right-handed alpha
Helix 15
AB6
A
373 375Right-handed 310
Helix 16
AB7
A
403 409Right-handed 310
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There are 3 sheets in PDB entry 7CV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
23 26anti-parallel
Strand 3
A
352 356parallel
Strand 4
A
296 305parallel
Strand 5
A
324 332anti-parallel
Strand 6
A
269 275anti-parallel
Strand 7
A
229 232parallel
Strand 8
A
383 386parallel
Strand 9
A
395 399parallel
Strand 10
A
205 209parallel
Strand 11
A
182 184anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
411 413anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 176first strand
Strand 2
A
153 157anti-parallel
Strand 3
A
190 194anti-parallel
Strand 4
A
197 201anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il