Analysis of interatomic Contacts of Structural Units in PDB entry:
7CWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CWE entry

There are 2 chains in PDB entry 7CWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 8ALA 337
B
 ASP 8ALA 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7CWE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 25Right-handed alpha
Helix 2
AA2
A
29 51Right-handed alpha
Helix 3
AA3
A
73 88Right-handed alpha
Helix 4
AA4
A
107 111Right-handed 310
Helix 5
AA5
A
149 154Right-handed 310
Helix 6
AA6
A
156 158Right-handed 310
Helix 7
AA7
A
221 233Right-handed alpha
Helix 8
AA8
A
248 260Right-handed alpha
Helix 9
AA9
A
281 292Right-handed alpha
Helix 10
AB1
A
302 306Right-handed 310
Helix 11
AB2
A
321 335Right-handed alpha
Helix 12
AB3
B
13 22Right-handed alpha
Helix 13
AB4
B
29 51Right-handed alpha
Helix 14
AB5
B
73 89Right-handed alpha
Helix 15
AB6
B
107 109Right-handed 310
Helix 16
AB7
B
149 154Right-handed 310
Helix 17
AB8
B
156 160Right-handed 310
Helix 18
AB9
B
213 220Right-handed 310
Helix 19
AC1
B
221 233Right-handed alpha
Helix 20
AC2
B
248 260Right-handed alpha
Helix 21
AC3
B
281 292Right-handed alpha
Helix 22
AC4
B
302 306Right-handed 310
Helix 23
AC5
B
321 335Right-handed alpha
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There are 4 sheets in PDB entry 7CWE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
92 97anti-parallel
Strand 3
A
114 119parallel
Strand 4
A
133 141anti-parallel
Strand 5
A
160 168anti-parallel
Strand 6
A
172 178anti-parallel
Strand 7
A
181 187anti-parallel
Strand 8
A
194 196anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 243first strand
Strand 2
A
209 211parallel
Strand 3
A
262 265parallel
Strand 4
A
317 320anti-parallel
Strand 5
A
295 297anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 105first strand
Strand 2
B
92 97anti-parallel
Strand 3
B
111 119parallel
Strand 4
B
133 141anti-parallel
Strand 5
B
162 168anti-parallel
Strand 6
B
172 177anti-parallel
Strand 7
B
182 187anti-parallel
Strand 8
B
194 196anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 243first strand
Strand 2
B
209 211parallel
Strand 3
B
262 265parallel
Strand 4
B
317 320anti-parallel
Strand 5
B
295 297anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il