Analysis of interatomic Contacts of Structural Units in PDB entry:
7CWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CWJ entry

There are 4 chains in PDB entry 7CWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24HIS 150
B
 THR 22HIS 152
C
 PRO 21LEU 148
D
 ALA 24HIS 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7CWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 80Right-handed 310
Helix 2
AA2
A
101 104Right-handed 310
Helix 3
AA3
A
126 130Right-handed alpha
Helix 4
AA4
B
76 80Right-handed 310
Helix 5
AA5
B
101 104Right-handed 310
Helix 6
AA6
B
126 130Right-handed alpha
Helix 7
AA7
C
76 80Right-handed 310
Helix 8
AA8
C
101 104Right-handed 310
Helix 9
AA9
C
126 130Right-handed alpha
Helix 10
AB1
C
131 133Right-handed 310
Helix 11
AB2
D
76 80Right-handed 310
Helix 12
AB3
D
101 104Right-handed 310
Helix 13
AB4
D
126 130Right-handed alpha
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There are 12 sheets in PDB entry 7CWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 72first strand
Strand 2
A
50 58anti-parallel
Strand 3
A
35 44anti-parallel
Strand 4
A
139 141anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 87first strand
Strand 2
A
90 97anti-parallel
Strand 3
A
106 113anti-parallel
Strand 4
A
123 125anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 87first strand
Strand 2
A
90 97anti-parallel
Strand 3
A
106 113anti-parallel
Strand 4
A
118 120anti-parallel
Strand 5
A
144 145anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 72first strand
Strand 2
B
50 58anti-parallel
Strand 3
B
35 44anti-parallel
Strand 4
B
139 141anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 87first strand
Strand 2
B
90 97anti-parallel
Strand 3
B
106 113anti-parallel
Strand 4
B
123 125anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 87first strand
Strand 2
B
90 97anti-parallel
Strand 3
B
106 113anti-parallel
Strand 4
B
118 120anti-parallel
Strand 5
B
144 145anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 27first strand
Strand 2
D
139 141parallel
Strand 3
D
35 44anti-parallel
Strand 4
D
50 58anti-parallel
Strand 5
D
65 72anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 72first strand
Strand 2
C
50 58anti-parallel
Strand 3
C
35 44anti-parallel
Strand 4
C
139 141anti-parallel
Strand 5
D
26 27parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 87first strand
Strand 2
C
90 97anti-parallel
Strand 3
C
106 113anti-parallel
Strand 4
C
123 125anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 87first strand
Strand 2
C
90 97anti-parallel
Strand 3
C
106 113anti-parallel
Strand 4
C
118 120anti-parallel
Strand 5
C
144 145anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 87first strand
Strand 2
D
90 97anti-parallel
Strand 3
D
106 113anti-parallel
Strand 4
D
123 125anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 87first strand
Strand 2
D
90 97anti-parallel
Strand 3
D
106 113anti-parallel
Strand 4
D
118 120anti-parallel
Strand 5
D
144 145anti-parallel
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