Analysis of interatomic Contacts of Structural Units in PDB entry:
7CWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CWQ entry

There are 2 chains in PDB entry 7CWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 157TYR 426
B
 MET 157TYR 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7CWQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
167 173Right-handed alpha
Helix 2
AA2
A
220 225Right-handed 310
Helix 3
AA3
A
226 233Right-handed alpha
Helix 4
AA4
A
249 269Right-handed alpha
Helix 5
AA5
A
290 303Right-handed alpha
Helix 6
AA6
A
344 352Right-handed alpha
Helix 7
AA7
A
377 394Right-handed alpha
Helix 8
AA8
A
396 398Right-handed 310
Helix 9
AA9
A
399 405Right-handed alpha
Helix 10
AB1
A
405 412Right-handed alpha
Helix 11
AB2
B
167 173Right-handed alpha
Helix 12
AB3
B
220 225Right-handed 310
Helix 13
AB4
B
226 233Right-handed alpha
Helix 14
AB5
B
249 269Right-handed alpha
Helix 15
AB6
B
290 303Right-handed alpha
Helix 16
AB7
B
344 352Right-handed alpha
Helix 17
AB8
B
377 394Right-handed alpha
Helix 18
AB9
B
396 398Right-handed 310
Helix 19
AC1
B
399 405Right-handed alpha
Helix 20
AC2
B
405 412Right-handed alpha
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There are 4 sheets in PDB entry 7CWQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 185first strand
Strand 2
A
195 201anti-parallel
Strand 3
A
237 242anti-parallel
Strand 4
A
208 214parallel
Strand 5
A
279 289parallel
Strand 6
A
308 312parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 333first strand
Strand 2
A
358 363parallel
Strand 3
A
417 422anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 185first strand
Strand 2
B
195 202anti-parallel
Strand 3
B
237 242anti-parallel
Strand 4
B
208 214parallel
Strand 5
B
279 289parallel
Strand 6
B
308 312parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
328 333first strand
Strand 2
B
358 363parallel
Strand 3
B
417 422anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il