Analysis of interatomic Contacts of Structural Units in PDB entry:
7CWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CWX entry

There are 3 chains in PDB entry 7CWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8ASP 618
B
 LEU 6ASP 618
C
 LYS 5LYS 612
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 7CWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
24 45Right-handed alpha
Helix 3
AA3
A
55 61Right-handed alpha
Helix 4
AA4
A
61 86Right-handed alpha
Helix 5
AA5
A
104 116Right-handed alpha
Helix 6
AA6
A
123 126Right-handed 310
Helix 7
AA7
A
127 145Right-handed alpha
Helix 8
AA8
A
157 183Right-handed alpha
Helix 9
AA9
A
184 188Right-handed 310
Helix 10
AB1
A
191 196Right-handed alpha
Helix 11
AB2
A
199 210Right-handed alpha
Helix 12
AB3
A
213 220Right-handed alpha
Helix 13
AB4
A
221 225Right-handed 310
Helix 14
AB5
A
240 252Right-handed alpha
Helix 15
AB6
A
254 256Right-handed 310
Helix 16
AB7
A
270 284Right-handed alpha
Helix 17
AB8
A
305 319Right-handed alpha
Helix 18
AB9
A
332 340Right-handed 310
Helix 19
AC1
A
348 350Right-handed 310
Helix 20
AC2
A
351 359Right-handed alpha
Helix 21
AC3
A
370 380Right-handed alpha
Helix 22
AC4
A
381 383Right-handed 310
Helix 23
AC5
A
407 414Right-handed 310
Helix 24
AC6
A
431 436Right-handed 310
Helix 25
AC7
A
442 456Right-handed alpha
Helix 26
AC8
A
462 483Right-handed alpha
Helix 27
AC9
A
517 532Right-handed alpha
Helix 28
AD1
A
538 542Right-handed 310
Helix 29
AD2
A
553 557Right-handed alpha
Helix 30
AD3
A
560 567Right-handed alpha
Helix 31
AD4
A
570 578Right-handed alpha
Helix 32
AD5
A
594 618Right-handed alpha
Helix 33
AD6
B
12 16Right-handed 310
Helix 34
AD7
B
24 45Right-handed alpha
Helix 35
AD8
B
55 60Right-handed alpha
Helix 36
AD9
B
61 86Right-handed alpha
Helix 37
AE1
B
104 116Right-handed alpha
Helix 38
AE2
B
123 126Right-handed 310
Helix 39
AE3
B
127 145Right-handed alpha
Helix 40
AE4
B
157 174Right-handed alpha
Helix 41
AE5
B
174 183Right-handed alpha
Helix 42
AE6
B
184 188Right-handed 310
Helix 43
AE7
B
191 196Right-handed alpha
Helix 44
AE8
B
199 210Right-handed alpha
Helix 45
AE9
B
213 220Right-handed alpha
Helix 46
AF1
B
221 225Right-handed 310
Helix 47
AF2
B
239 241Right-handed 310
Helix 48
AF3
B
243 243Right-handed 310
Helix 49
AF4
B
244 251Right-handed alpha
Helix 50
AF5
B
254 256Right-handed 310
Helix 51
AF6
B
270 284Right-handed alpha
Helix 52
AF7
B
305 318Right-handed alpha
Helix 53
AF8
B
332 340Right-handed 310
Helix 54
AF9
B
348 350Right-handed 310
Helix 55
AG1
B
351 359Right-handed alpha
Helix 56
AG2
B
370 379Right-handed alpha
Helix 57
AG3
B
380 383Right-handed 310
Helix 58
AG4
B
407 414Right-handed 310
Helix 59
AG5
B
431 436Right-handed 310
Helix 60
AG6
B
442 456Right-handed alpha
Helix 61
AG7
B
462 482Right-handed alpha
Helix 62
AG8
B
517 532Right-handed alpha
Helix 63
AG9
B
538 542Right-handed 310
Helix 64
AH1
B
553 557Right-handed alpha
Helix 65
AH2
B
560 568Right-handed alpha
Helix 66
AH3
B
570 578Right-handed alpha
Helix 67
AH4
B
594 617Right-handed alpha
Helix 68
AH5
C
12 16Right-handed 310
Helix 69
AH6
C
24 46Right-handed alpha
Helix 70
AH7
C
57 60Right-handed 310
Helix 71
AH8
C
61 86Right-handed alpha
Helix 72
AH9
C
104 116Right-handed alpha
Helix 73
AI1
C
123 126Right-handed 310
Helix 74
AI2
C
127 145Right-handed alpha
Helix 75
AI3
C
157 183Right-handed alpha
Helix 76
AI4
C
184 188Right-handed 310
Helix 77
AI5
C
191 196Right-handed alpha
Helix 78
AI6
C
199 210Right-handed alpha
Helix 79
AI7
C
213 220Right-handed alpha
Helix 80
AI8
C
221 225Right-handed 310
Helix 81
AI9
C
240 252Right-handed alpha
Helix 82
AJ1
C
254 256Right-handed 310
Helix 83
AJ2
C
270 284Right-handed alpha
Helix 84
AJ3
C
305 317Right-handed alpha
Helix 85
AJ4
C
332 340Right-handed 310
Helix 86
AJ5
C
348 350Right-handed 310
Helix 87
AJ6
C
351 359Right-handed alpha
Helix 88
AJ7
C
370 379Right-handed alpha
Helix 89
AJ8
C
380 383Right-handed 310
Helix 90
AJ9
C
407 414Right-handed 310
Helix 91
AK1
C
431 436Right-handed 310
Helix 92
AK2
C
442 456Right-handed alpha
Helix 93
AK3
C
462 483Right-handed alpha
Helix 94
AK4
C
517 531Right-handed alpha
Helix 95
AK5
C
553 557Right-handed alpha
Helix 96
AK6
C
560 568Right-handed alpha
Helix 97
AK7
C
570 578Right-handed alpha
Helix 98
AK8
C
594 611Right-handed alpha
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There are 6 sheets in PDB entry 7CWX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
545 552parallel
Strand 3
A
579 586anti-parallel
Strand 4
A
505 512anti-parallel
Strand 5
A
491 497anti-parallel
Strand 6
A
485 488anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 155first strand
Strand 2
A
401 405anti-parallel
Strand 3
A
385 388anti-parallel
Strand 4
A
324 329parallel
Strand 5
A
288 294parallel
Strand 6
A
233 237parallel
Strand 7
A
258 261parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 96first strand
Strand 2
B
545 552parallel
Strand 3
B
579 586anti-parallel
Strand 4
B
505 512anti-parallel
Strand 5
B
491 497anti-parallel
Strand 6
B
485 488anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 155first strand
Strand 2
B
401 405anti-parallel
Strand 3
B
385 388anti-parallel
Strand 4
B
324 329parallel
Strand 5
B
288 294parallel
Strand 6
B
233 237parallel
Strand 7
B
258 261parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 96first strand
Strand 2
C
545 552parallel
Strand 3
C
579 586anti-parallel
Strand 4
C
505 508anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
151 155first strand
Strand 2
C
401 405anti-parallel
Strand 3
C
385 388anti-parallel
Strand 4
C
324 329parallel
Strand 5
C
288 294parallel
Strand 6
C
233 237parallel
Strand 7
C
258 261parallel
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