Analysis of interatomic Contacts of Structural Units in PDB entry:
7CY4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CY4 entry

There is 1 chain in PDB entry 7CY4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -366PRO 508
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7CY4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-357 -342Right-handed alpha
Helix 2
AA2
A
-331 -321Right-handed alpha
Helix 3
AA3
A
-309 -300Right-handed alpha
Helix 4
AA4
A
-291 -286Right-handed alpha
Helix 5
AA5
A
-283 -277Right-handed alpha
Helix 6
AA6
A
-245 -243Right-handed 310
Helix 7
AA7
A
-242 -231Right-handed alpha
Helix 8
AA8
A
-220 -210Right-handed alpha
Helix 9
AA9
A
-188 -172Right-handed alpha
Helix 10
AB1
A
-164 -154Right-handed alpha
Helix 11
AB2
A
-145 -143Right-handed 310
Helix 12
AB3
A
-142 -136Right-handed alpha
Helix 13
AB4
A
-101 -90Right-handed alpha
Helix 14
AB5
A
-87 -76Right-handed alpha
Helix 15
AB6
A
-69 -61Right-handed alpha
Helix 16
AB7
A
-59 -46Right-handed alpha
Helix 17
AB8
A
-38 -21Right-handed alpha
Helix 18
AB9
A
-17 15Right-handed alpha
Helix 19
AC1
A
22 47Right-handed alpha
Helix 20
AC2
A
99 111Right-handed alpha
Helix 21
AC3
A
126 143Right-handed alpha
Helix 22
AC4
A
148 157Right-handed alpha
Helix 23
AC5
A
200 204Right-handed 310
Helix 24
AC6
A
220 236Right-handed alpha
Helix 25
AC7
A
270 280Right-handed alpha
Helix 26
AC8
A
285 306Right-handed alpha
Helix 27
AC9
A
307 317Right-handed alpha
Helix 28
AD1
A
321 325Right-handed 310
Helix 29
AD2
A
374 376Right-handed 310
Helix 30
AD3
A
418 433Right-handed alpha
Helix 31
AD4
A
435 456Right-handed alpha
Helix 32
AD5
A
456 481Right-handed alpha
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There are 11 sheets in PDB entry 7CY4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-337 -335first strand
Strand 2
A
-365 -363parallel
Strand 3
A
-314 -310parallel
Strand 4
A
-115 -107anti-parallel
Strand 5
A
-267 -262anti-parallel
Strand 6
A
-72 -71anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-337 -335first strand
Strand 2
A
-365 -363parallel
Strand 3
A
-314 -310parallel
Strand 4
A
-115 -107anti-parallel
Strand 5
A
-45 -44parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-275 -274first strand
Strand 2
A
-271 -270anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-228 -226first strand
Strand 2
A
-151 -146parallel
Strand 3
A
-259 -255anti-parallel
Strand 4
A
-131 -128anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-206 -201first strand
Strand 2
A
-198 -191anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
55 57anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
84 86anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 81first strand
Strand 2
A
65 69anti-parallel
Strand 3
A
364 368anti-parallel
Strand 4
A
402 406anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
120 125anti-parallel
Strand 3
A
166 173parallel
Strand 4
A
206 216anti-parallel
Strand 5
A
502 504anti-parallel
Strand 6
A
195 196parallel
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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
120 125anti-parallel
Strand 3
A
166 173parallel
Strand 4
A
206 216anti-parallel
Strand 5
A
386 390anti-parallel
Strand 6
A
354 360anti-parallel
Strand 7
A
410 416anti-parallel
Strand 8
A
333 338anti-parallel
Strand 9
A
251 255anti-parallel
Strand 10
A
240 242anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 160first strand
Strand 2
A
378 380parallel
Strand 3
A
371 373anti-parallel
Strand 4
A
397 399anti-parallel
Strand 5
A
342 345anti-parallel
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