Analysis of interatomic Contacts of Structural Units in PDB entry:
7CYK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CYK entry

There are 2 chains in PDB entry 7CYK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 7GLU 307
B
ARG 7VAL 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 7CYK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
8 23Right-handed alpha
Helix 2
AA2
A
23 28Right-handed alpha
Helix 3
AA3
A
29 32Right-handed 310
Helix 4
AA4
A
33 47Right-handed alpha
Helix 5
AA5
A
50 60Right-handed alpha
Helix 6
AA6
A
60 86Right-handed alpha
Helix 7
AA7
A
89 102Right-handed alpha
Helix 8
AA8
A
109 115Right-handed alpha
Helix 9
AA9
A
118 145Right-handed alpha
Helix 10
AB1
A
152 164Right-handed alpha
Helix 11
AB2
A
164 178Right-handed alpha
Helix 12
AB3
A
178 186Right-handed alpha
Helix 13
AB4
A
188 208Right-handed alpha
Helix 14
AB5
A
208 242Right-handed alpha
Helix 15
AB6
A
244 257Right-handed alpha
Helix 16
AB7
A
259 271Right-handed alpha
Helix 17
AB8
A
273 275Right-handed 310
Helix 18
AB9
A
276 298Right-handed alpha
Helix 19
AC1
A
303 307Right-handed 310
Helix 20
AC2
B
8 23Right-handed alpha
Helix 21
AC3
B
23 28Right-handed alpha
Helix 22
AC4
B
29 32Right-handed 310
Helix 23
AC5
B
33 47Right-handed alpha
Helix 24
AC6
B
51 60Right-handed alpha
Helix 25
AC7
B
60 86Right-handed alpha
Helix 26
AC8
B
89 102Right-handed alpha
Helix 27
AC9
B
109 115Right-handed alpha
Helix 28
AD1
B
118 145Right-handed alpha
Helix 29
AD2
B
152 164Right-handed alpha
Helix 30
AD3
B
164 178Right-handed alpha
Helix 31
AD4
B
178 186Right-handed alpha
Helix 32
AD5
B
188 208Right-handed alpha
Helix 33
AD6
B
208 242Right-handed alpha
Helix 34
AD7
B
244 257Right-handed alpha
Helix 35
AD8
B
259 271Right-handed alpha
Helix 36
AD9
B
272 298Right-handed alpha
Back to top of page
There are no sheets in PDB entry 7CYK

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il