Analysis of interatomic Contacts of Structural Units in PDB entry:
7CZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CZA entry

There are 2 chains in PDB entry 7CZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 451
B
 MET 1SER 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 7CZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 33Right-handed 310
Helix 2
AA2
A
35 49Right-handed alpha
Helix 3
AA3
A
70 76Right-handed alpha
Helix 4
AA4
A
84 93Right-handed alpha
Helix 5
AA5
A
111 127Right-handed alpha
Helix 6
AA6
A
139 145Right-handed alpha
Helix 7
AA7
A
153 174Right-handed alpha
Helix 8
AA8
A
193 196Right-handed 310
Helix 9
AA9
A
230 241Right-handed alpha
Helix 10
AB1
A
250 268Right-handed alpha
Helix 11
AB2
A
271 275Right-handed 310
Helix 12
AB3
A
288 302Right-handed alpha
Helix 13
AB4
A
304 316Right-handed alpha
Helix 14
AB5
A
354 362Right-handed 310
Helix 15
AB6
A
369 384Right-handed alpha
Helix 16
AB7
A
396 413Right-handed alpha
Helix 17
AB8
A
424 430Right-handed alpha
Helix 18
AB9
A
443 447Right-handed 310
Helix 19
AC1
B
21 25Right-handed 310
Helix 20
AC2
B
29 33Right-handed 310
Helix 21
AC3
B
35 49Right-handed alpha
Helix 22
AC4
B
70 76Right-handed alpha
Helix 23
AC5
B
84 93Right-handed alpha
Helix 24
AC6
B
94 96Right-handed 310
Helix 25
AC7
B
111 127Right-handed alpha
Helix 26
AC8
B
139 145Right-handed alpha
Helix 27
AC9
B
153 175Right-handed alpha
Helix 28
AD1
B
193 196Right-handed 310
Helix 29
AD2
B
230 241Right-handed alpha
Helix 30
AD3
B
250 268Right-handed alpha
Helix 31
AD4
B
288 301Right-handed alpha
Helix 32
AD5
B
305 317Right-handed alpha
Helix 33
AD6
B
354 362Right-handed 310
Helix 34
AD7
B
369 383Right-handed alpha
Helix 35
AD8
B
396 413Right-handed alpha
Helix 36
AD9
B
424 430Right-handed alpha
Helix 37
AE1
B
441 447Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 7CZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 368first strand
Strand 2
A
276 285parallel
Strand 3
A
387 390parallel
Strand 4
A
6 12parallel
Strand 5
A
53 57parallel
Strand 6
A
100 106parallel
Strand 7
A
130 135parallel
Strand 8
A
223 226parallel
Strand 9
A
243 246parallel
Strand 10
A
276 285parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
189 191anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
207 208anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
364 368first strand
Strand 2
B
276 285parallel
Strand 3
B
387 390parallel
Strand 4
B
6 12parallel
Strand 5
B
53 57parallel
Strand 6
B
100 106parallel
Strand 7
B
130 135parallel
Strand 8
B
223 226parallel
Strand 9
B
243 246parallel
Strand 10
B
276 285parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 184first strand
Strand 2
B
189 191anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 202first strand
Strand 2
B
207 208anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il