Analysis of interatomic Contacts of Structural Units in PDB entry:
7CZG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CZG entry

There are 4 chains in PDB entry 7CZG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1493ASN 1591
B
 SER 1493LYS 1592
C
 ALA 1487LYS 1592
D
 ALA 1487LYS 1592
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 7CZG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1513 1516Right-handed 310
Helix 2
AA2
A
1532 1539Right-handed 310
Helix 3
AA3
B
1513 1516Right-handed 310
Helix 4
AA4
B
1533 1538Right-handed alpha
Helix 5
AA5
C
1532 1539Right-handed 310
Helix 6
AA6
D
1513 1516Right-handed 310
Helix 7
AA7
D
1532 1539Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 7CZG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1496 1497first strand
Strand 2
C
1495 1496anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1506 1512first strand
Strand 2
A
1517 1520anti-parallel
Strand 3
A
1528 1530anti-parallel
Strand 4
A
1581 1589parallel
Strand 5
A
1554 1566anti-parallel
Strand 6
A
1506 1512anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1506 1512first strand
Strand 2
B
1517 1520anti-parallel
Strand 3
B
1528 1530anti-parallel
Strand 4
B
1581 1589parallel
Strand 5
B
1554 1566anti-parallel
Strand 6
B
1506 1512anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1506 1512first strand
Strand 2
C
1517 1520anti-parallel
Strand 3
C
1528 1530anti-parallel
Strand 4
C
1581 1589parallel
Strand 5
C
1554 1566anti-parallel
Strand 6
C
1506 1512anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1506 1512first strand
Strand 2
D
1517 1520anti-parallel
Strand 3
D
1528 1530anti-parallel
Strand 4
D
1581 1589parallel
Strand 5
D
1554 1566anti-parallel
Strand 6
D
1506 1512anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il