Analysis of interatomic Contacts of Structural Units in PDB entry:
7D0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D0M entry

There is 1 chain in PDB entry 7D0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ARG 495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7D0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 26Right-handed alpha
Helix 2
AA2
A
41 45Right-handed 310
Helix 3
AA3
A
48 69Right-handed alpha
Helix 4
AA4
A
79 92Right-handed alpha
Helix 5
AA5
A
103 120Right-handed alpha
Helix 6
AA6
A
134 142Right-handed alpha
Helix 7
AA7
A
149 160Right-handed alpha
Helix 8
AA8
A
171 176Right-handed alpha
Helix 9
AA9
A
185 191Right-handed alpha
Helix 10
AB1
A
195 199Right-handed 310
Helix 11
AB2
A
213 232Right-handed alpha
Helix 12
AB3
A
240 245Right-handed 310
Helix 13
AB4
A
251 257Right-handed alpha
Helix 14
AB5
A
261 278Right-handed alpha
Helix 15
AB6
A
283 286Right-handed 310
Helix 16
AB7
A
287 301Right-handed alpha
Helix 17
AB8
A
323 332Right-handed alpha
Helix 18
AB9
A
337 351Right-handed alpha
Helix 19
AC1
A
354 366Right-handed alpha
Helix 20
AC2
A
373 385Right-handed alpha
Helix 21
AC3
A
389 401Right-handed alpha
Helix 22
AC4
A
416 423Right-handed alpha
Helix 23
AC5
A
426 433Right-handed alpha
Helix 24
AC6
A
434 437Right-handed 310
Helix 25
AC7
A
440 445Right-handed alpha
Helix 26
AC8
A
446 450Right-handed 310
Helix 27
AC9
A
451 458Right-handed alpha
Helix 28
AD1
A
472 490Right-handed alpha
Helix 29
AD2
A
491 495Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7D0M.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 77first strand
Strand 2
A
30 37parallel
Strand 3
A
4 9parallel
Strand 4
A
93 99parallel
Strand 5
A
123 127parallel
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