Analysis of interatomic Contacts of Structural Units in PDB entry:
7D0N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D0N entry

There is 1 chain in PDB entry 7D0N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 21GLN 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7D0N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 43Right-handed alpha
Helix 2
AA2
A
56 62Right-handed alpha
Helix 3
AA3
A
66 87Right-handed alpha
Helix 4
AA4
A
97 110Right-handed alpha
Helix 5
AA5
A
121 138Right-handed alpha
Helix 6
AA6
A
152 159Right-handed alpha
Helix 7
AA7
A
167 178Right-handed alpha
Helix 8
AA8
A
189 196Right-handed alpha
Helix 9
AA9
A
203 208Right-handed alpha
Helix 10
AB1
A
231 245Right-handed alpha
Helix 11
AB2
A
259 263Right-handed 310
Helix 12
AB3
A
269 275Right-handed alpha
Helix 13
AB4
A
279 294Right-handed alpha
Helix 14
AB5
A
305 319Right-handed alpha
Helix 15
AB6
A
341 350Right-handed alpha
Helix 16
AB7
A
355 369Right-handed alpha
Helix 17
AB8
A
372 384Right-handed alpha
Helix 18
AB9
A
391 403Right-handed alpha
Helix 19
AC1
A
407 419Right-handed alpha
Helix 20
AC2
A
434 441Right-handed alpha
Helix 21
AC3
A
444 451Right-handed alpha
Helix 22
AC4
A
452 455Right-handed 310
Helix 23
AC5
A
458 463Right-handed alpha
Helix 24
AC6
A
469 477Right-handed alpha
Helix 25
AC7
A
490 507Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7D0N.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
49 55parallel
Strand 3
A
23 26parallel
Strand 4
A
113 117parallel
Strand 5
A
141 145parallel
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