Analysis of interatomic Contacts of Structural Units in PDB entry:
7D14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D14 entry

There are 2 chains in PDB entry 7D14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 85SER 1138
B
 LEU 85SER 1138
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 7D14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 107Right-handed alpha
Helix 2
AA2
A
123 133Right-handed alpha
Helix 3
AA3
A
142 149Right-handed alpha
Helix 4
AA4
A
151 177Right-handed alpha
Helix 5
AA5
A
186 221Right-handed alpha
Helix 6
AA6
A
223 229Right-handed alpha
Helix 7
AA7
A
247 270Right-handed alpha
Helix 8
AA8
A
271 278Right-handed alpha
Helix 9
AA9
A
280 300Right-handed alpha
Helix 10
AB1
A
422 431Right-handed alpha
Helix 11
AB2
A
432 434Right-handed 310
Helix 12
AB3
A
437 441Right-handed 310
Helix 13
AB4
A
452 457Right-handed alpha
Helix 14
AB5
A
458 476Right-handed alpha
Helix 15
AB6
A
509 539Right-handed alpha
Helix 16
AB7
A
546 550Right-handed 310
Helix 17
AB8
A
558 573Right-handed alpha
Helix 18
AB9
A
576 605Right-handed alpha
Helix 19
AC1
A
618 637Right-handed alpha
Helix 20
AC2
A
637 661Right-handed alpha
Helix 21
AC3
A
667 682Right-handed alpha
Helix 22
AC4
A
711 723Right-handed alpha
Helix 23
AC5
A
737 759Right-handed alpha
Helix 24
AC6
A
811 824Right-handed alpha
Helix 25
AC7
A
859 869Right-handed alpha
Helix 26
AC8
A
893 905Right-handed alpha
Helix 27
AC9
A
927 937Right-handed alpha
Helix 28
AD1
A
1108 1113Right-handed alpha
Helix 29
AD2
B
98 107Right-handed alpha
Helix 30
AD3
B
123 133Right-handed alpha
Helix 31
AD4
B
142 149Right-handed alpha
Helix 32
AD5
B
151 177Right-handed alpha
Helix 33
AD6
B
186 221Right-handed alpha
Helix 34
AD7
B
223 229Right-handed alpha
Helix 35
AD8
B
247 270Right-handed alpha
Helix 36
AD9
B
271 278Right-handed alpha
Helix 37
AE1
B
280 300Right-handed alpha
Helix 38
AE2
B
422 431Right-handed alpha
Helix 39
AE3
B
432 434Right-handed 310
Helix 40
AE4
B
437 441Right-handed 310
Helix 41
AE5
B
452 457Right-handed alpha
Helix 42
AE6
B
458 476Right-handed alpha
Helix 43
AE7
B
509 539Right-handed alpha
Helix 44
AE8
B
546 550Right-handed 310
Helix 45
AE9
B
558 573Right-handed alpha
Helix 46
AF1
B
576 605Right-handed alpha
Helix 47
AF2
B
618 637Right-handed alpha
Helix 48
AF3
B
637 661Right-handed alpha
Helix 49
AF4
B
667 682Right-handed alpha
Helix 50
AF5
B
711 723Right-handed alpha
Helix 51
AF6
B
737 759Right-handed alpha
Helix 52
AF7
B
811 824Right-handed alpha
Helix 53
AF8
B
859 869Right-handed alpha
Helix 54
AF9
B
893 905Right-handed alpha
Helix 55
AG1
B
927 937Right-handed alpha
Helix 56
AG2
B
1108 1113Right-handed alpha
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There are 2 sheets in PDB entry 7D14. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 768first strand
Strand 2
A
728 733parallel
Strand 3
A
697 700parallel
Strand 4
A
793 797parallel
Strand 5
A
827 831parallel
Strand 6
A
1123 1127anti-parallel
Strand 7
A
1092 1095parallel
Strand 8
A
849 853parallel
Strand 9
A
879 885parallel
Strand 10
A
911 916parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
764 768first strand
Strand 2
B
728 733parallel
Strand 3
B
697 700parallel
Strand 4
B
793 797parallel
Strand 5
B
827 831parallel
Strand 6
B
1123 1127anti-parallel
Strand 7
B
1092 1095parallel
Strand 8
B
849 853parallel
Strand 9
B
879 885parallel
Strand 10
B
911 916parallel
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