Analysis of interatomic Contacts of Structural Units in PDB entry:
7D18


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D18 entry

There is 1 chain in PDB entry 7D18 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 16GLY 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7D18. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 44Right-handed alpha
Helix 2
AA2
A
51 64Right-handed alpha
Helix 3
AA3
A
65 72Right-handed alpha
Helix 4
AA4
A
114 118Right-handed 310
Helix 5
AA5
A
128 145Right-handed alpha
Helix 6
AA6
A
172 185Right-handed alpha
Helix 7
AA7
A
186 189Right-handed 310
Helix 8
AA8
A
214 229Right-handed alpha
Helix 9
AA9
A
230 232Right-handed 310
Helix 10
AB1
A
245 250Right-handed alpha
Helix 11
AB2
A
281 285Right-handed 310
Helix 12
AB3
A
286 308Right-handed alpha
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There are 2 sheets in PDB entry 7D18. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 83first strand
Strand 2
A
86 97anti-parallel
Strand 3
A
150 157anti-parallel
Strand 4
A
101 110parallel
Strand 5
A
191 198parallel
Strand 6
A
255 259parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 210first strand
Strand 2
A
234 239parallel
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