Analysis of interatomic Contacts of Structural Units in PDB entry:
7D1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D1H entry

There is 1 chain in PDB entry 7D1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 28LEU 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7D1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 46Right-handed alpha
Helix 2
AA2
A
49 62Right-handed alpha
Helix 3
AA3
A
71 88Right-handed alpha
Helix 4
AA4
A
145 159Right-handed alpha
Helix 5
AA5
A
159 168Right-handed alpha
Helix 6
AA6
A
195 208Right-handed alpha
Helix 7
AA7
A
211 215Right-handed 310
Helix 8
AA8
A
226 229Right-handed 310
Helix 9
AA9
A
251 253Right-handed 310
Helix 10
AB1
A
254 271Right-handed alpha
Helix 11
AB2
A
299 304Right-handed alpha
Helix 12
AB3
A
327 331Right-handed 310
Helix 13
AB4
A
332 352Right-handed alpha
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There are 2 sheets in PDB entry 7D1H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 101first strand
Strand 2
A
104 114anti-parallel
Strand 3
A
173 180anti-parallel
Strand 4
A
121 128parallel
Strand 5
A
231 237parallel
Strand 6
A
309 312parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
286 290parallel
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