Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 7D2G entry
There are 4 chains in PDB entry 7D2G
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
GLY 98 | HIS 148 |
B
|
PRO 97 | SER 146 |
C
|
SER 99 | VAL 145 |
D
|
PRO 97 | SER 146 |
Back to top of page
There are 4
helices in PDB entry 7D2G. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 101 |
148 | Right-handed alpha |
| Helix 2 |
AA2 | B
| 98 |
146 | Right-handed alpha |
| Helix 3 |
AA3 | C
| 100 |
145 | Right-handed alpha |
| Helix 4 |
AA4 | D
| 98 |
146 | Right-handed alpha |
Back to top of page
There are no sheets in PDB entry
7D2G
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il