Analysis of interatomic Contacts of Structural Units in PDB entry:
7D2K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D2K entry

There is 1 chain in PDB entry 7D2K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 29ASP 637
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7D2K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 47Right-handed alpha
Helix 2
AA2
A
47 56Right-handed alpha
Helix 3
AA3
A
57 66Right-handed alpha
Helix 4
AA4
A
81 89Right-handed alpha
Helix 5
AA5
A
91 102Right-handed alpha
Helix 6
AA6
A
104 108Right-handed 310
Helix 7
AA7
A
119 127Right-handed alpha
Helix 8
AA8
A
129 138Right-handed alpha
Helix 9
AA9
A
149 153Right-handed 310
Helix 10
AB1
A
165 173Right-handed alpha
Helix 11
AB2
A
175 184Right-handed alpha
Helix 12
AB3
A
199 205Right-handed alpha
Helix 13
AB4
A
208 221Right-handed alpha
Helix 14
AB5
A
230 234Right-handed 310
Helix 15
AB6
A
241 250Right-handed alpha
Helix 16
AB7
A
251 260Right-handed alpha
Helix 17
AB8
A
290 298Right-handed alpha
Helix 18
AB9
A
305 309Right-handed 310
Helix 19
AC1
A
311 322Right-handed alpha
Helix 20
AC2
A
323 347Right-handed alpha
Helix 21
AC3
A
380 403Right-handed alpha
Helix 22
AC4
A
421 443Right-handed alpha
Helix 23
AC5
A
450 463Right-handed alpha
Helix 24
AC6
A
464 468Right-handed 310
Helix 25
AC7
A
474 486Right-handed alpha
Helix 26
AC8
A
487 511Right-handed alpha
Helix 27
AC9
A
524 537Right-handed alpha
Helix 28
AD1
A
551 566Right-handed alpha
Helix 29
AD2
A
567 583Right-handed alpha
Helix 30
AD3
A
586 607Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7D2K.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 269first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
628 632anti-parallel
Strand 4
A
617 618anti-parallel
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