Analysis of interatomic Contacts of Structural Units in PDB entry:
7D3T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D3T entry

There are 8 chains in PDB entry 7D3T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 247PRO 305
B
 THR 247PRO 305
C
 THR 247PRO 305
D
 THR 247SER 308
E
 G 1 A 16
F
 C 1 G 16
G
 G 1 A 16
H
 C 1 G 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7D3T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
252 266Right-handed alpha
Helix 2
AA2
A
267 272Right-handed alpha
Helix 3
AA3
A
273 282Right-handed alpha
Helix 4
AA4
A
287 300Right-handed alpha
Helix 5
AA5
B
252 266Right-handed alpha
Helix 6
AA6
B
273 282Right-handed alpha
Helix 7
AA7
B
287 300Right-handed alpha
Helix 8
AA8
C
252 266Right-handed alpha
Helix 9
AA9
C
273 280Right-handed alpha
Helix 10
AB1
C
287 301Right-handed alpha
Helix 11
AB2
D
252 266Right-handed alpha
Helix 12
AB3
D
273 282Right-handed alpha
Helix 13
AB4
D
287 298Right-handed alpha
Helix 14
AB5
D
303 307Right-handed 310
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There are no sheets in PDB entry 7D3T
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il