Analysis of interatomic Contacts of Structural Units in PDB entry:
7D5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D5I entry

There are 2 chains in PDB entry 7D5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 487
B
 MET 1SER 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7D5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 43Right-handed alpha
Helix 2
AA2
A
45 70Right-handed alpha
Helix 3
AA3
A
71 80Right-handed alpha
Helix 4
AA4
A
80 102Right-handed alpha
Helix 5
AA5
A
102 116Right-handed alpha
Helix 6
AA6
A
121 151Right-handed alpha
Helix 7
AA7
A
170 175Right-handed alpha
Helix 8
AA8
A
176 213Right-handed alpha
Helix 9
AA9
A
215 217Right-handed 310
Helix 10
AB1
A
218 257Right-handed alpha
Helix 11
AB2
A
257 265Right-handed alpha
Helix 12
AB3
A
317 327Right-handed alpha
Helix 13
AB4
A
337 349Right-handed alpha
Helix 14
AB5
A
350 364Right-handed alpha
Helix 15
AB6
A
372 382Right-handed alpha
Helix 16
AB7
A
384 401Right-handed alpha
Helix 17
AB8
A
428 461Right-handed alpha
Helix 18
AB9
B
2 41Right-handed alpha
Helix 19
AC1
B
46 55Right-handed alpha
Helix 20
AC2
B
56 58Right-handed 310
Helix 21
AC3
B
60 79Right-handed alpha
Helix 22
AC4
B
79 90Right-handed alpha
Helix 23
AC5
B
90 111Right-handed alpha
Helix 24
AC6
B
112 114Right-handed 310
Helix 25
AC7
B
116 148Right-handed alpha
Helix 26
AC8
B
166 190Right-handed alpha
Helix 27
AC9
B
196 227Right-handed alpha
Helix 28
AD1
B
231 251Right-handed alpha
Helix 29
AD2
B
257 277Right-handed alpha
Helix 30
AD3
B
301 330Right-handed alpha
Helix 31
AD4
B
335 339Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7D5I.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 406first strand
Strand 2
A
418 419anti-parallel
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