Analysis of interatomic Contacts of Structural Units in PDB entry:
7D60

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7D60 entry

There are 11 chains in PDB entry 7D60 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 288
B	MET 1	GLY 288
C	MET 1	GLY 288
D	MET 1	GLY 288
E	MET 1	GLY 288
F	MET 1	GLY 288
G	MET 1	GLY 288
H	MET 1	GLY 288
I	MET 1	GLY 288
J	MET 1	GLY 288
K	MET 1	GLY 288

There are176 helices in PDB entry 7D60. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	8	Right-handed alpha
Helix 2	AA2	A	9	14	Right-handed alpha
Helix 3	AA3	A	14	38	Right-handed alpha
Helix 4	AA4	A	46	69	Right-handed alpha
Helix 5	AA5	A	70	78	Right-handed alpha
Helix 6	AA6	A	79	87	Right-handed 310
Helix 7	AA7	A	94	107	Right-handed alpha
Helix 8	AA8	A	108	121	Right-handed alpha
Helix 9	AA9	A	122	131	Right-handed alpha
Helix 10	AB1	A	137	142	Right-handed alpha
Helix 11	AB2	A	146	150	Right-handed 310
Helix 12	AB3	A	152	156	Right-handed 310
Helix 13	AB4	A	167	204	Right-handed alpha
Helix 14	AB5	A	208	247	Right-handed alpha
Helix 15	AB6	A	258	265	Right-handed alpha
Helix 16	AB7	A	279	288	Right-handed alpha
Helix 17	AB8	B	2	8	Right-handed alpha
Helix 18	AB9	B	9	14	Right-handed alpha
Helix 19	AC1	B	14	38	Right-handed alpha
Helix 20	AC2	B	46	69	Right-handed alpha
Helix 21	AC3	B	70	78	Right-handed alpha
Helix 22	AC4	B	79	87	Right-handed 310
Helix 23	AC5	B	94	107	Right-handed alpha
Helix 24	AC6	B	108	121	Right-handed alpha
Helix 25	AC7	B	122	131	Right-handed alpha
Helix 26	AC8	B	137	142	Right-handed alpha
Helix 27	AC9	B	146	150	Right-handed 310
Helix 28	AD1	B	152	156	Right-handed 310
Helix 29	AD2	B	167	204	Right-handed alpha
Helix 30	AD3	B	208	247	Right-handed alpha
Helix 31	AD4	B	258	265	Right-handed alpha
Helix 32	AD5	B	279	288	Right-handed alpha
Helix 33	AD6	C	2	8	Right-handed alpha
Helix 34	AD7	C	9	14	Right-handed alpha
Helix 35	AD8	C	14	38	Right-handed alpha
Helix 36	AD9	C	46	69	Right-handed alpha
Helix 37	AE1	C	70	78	Right-handed alpha
Helix 38	AE2	C	79	87	Right-handed 310
Helix 39	AE3	C	94	107	Right-handed alpha
Helix 40	AE4	C	108	121	Right-handed alpha
Helix 41	AE5	C	122	131	Right-handed alpha
Helix 42	AE6	C	137	142	Right-handed alpha
Helix 43	AE7	C	146	150	Right-handed 310
Helix 44	AE8	C	152	156	Right-handed 310
Helix 45	AE9	C	167	204	Right-handed alpha
Helix 46	AF1	C	208	247	Right-handed alpha
Helix 47	AF2	C	258	265	Right-handed alpha
Helix 48	AF3	C	279	288	Right-handed alpha
Helix 49	AF4	D	2	8	Right-handed alpha
Helix 50	AF5	D	9	14	Right-handed alpha
Helix 51	AF6	D	14	38	Right-handed alpha
Helix 52	AF7	D	46	69	Right-handed alpha
Helix 53	AF8	D	70	78	Right-handed alpha
Helix 54	AF9	D	79	87	Right-handed 310
Helix 55	AG1	D	94	107	Right-handed alpha
Helix 56	AG2	D	108	121	Right-handed alpha
Helix 57	AG3	D	122	131	Right-handed alpha
Helix 58	AG4	D	137	142	Right-handed alpha
Helix 59	AG5	D	146	150	Right-handed 310
Helix 60	AG6	D	152	156	Right-handed 310
Helix 61	AG7	D	167	204	Right-handed alpha
Helix 62	AG8	D	208	247	Right-handed alpha
Helix 63	AG9	D	258	265	Right-handed alpha
Helix 64	AH1	D	279	288	Right-handed alpha
Helix 65	AH2	E	2	8	Right-handed alpha
Helix 66	AH3	E	9	14	Right-handed alpha
Helix 67	AH4	E	14	38	Right-handed alpha
Helix 68	AH5	E	46	69	Right-handed alpha
Helix 69	AH6	E	70	78	Right-handed alpha
Helix 70	AH7	E	79	87	Right-handed 310
Helix 71	AH8	E	94	107	Right-handed alpha
Helix 72	AH9	E	108	121	Right-handed alpha
Helix 73	AI1	E	122	131	Right-handed alpha
Helix 74	AI2	E	137	142	Right-handed alpha
Helix 75	AI3	E	146	150	Right-handed 310
Helix 76	AI4	E	152	156	Right-handed 310
Helix 77	AI5	E	167	204	Right-handed alpha
Helix 78	AI6	E	208	247	Right-handed alpha
Helix 79	AI7	E	258	265	Right-handed alpha
Helix 80	AI8	E	279	288	Right-handed alpha
Helix 81	AI9	F	2	8	Right-handed alpha
Helix 82	AJ1	F	9	14	Right-handed alpha
Helix 83	AJ2	F	14	38	Right-handed alpha
Helix 84	AJ3	F	46	69	Right-handed alpha
Helix 85	AJ4	F	70	78	Right-handed alpha
Helix 86	AJ5	F	79	87	Right-handed 310
Helix 87	AJ6	F	94	107	Right-handed alpha
Helix 88	AJ7	F	108	121	Right-handed alpha
Helix 89	AJ8	F	122	131	Right-handed alpha
Helix 90	AJ9	F	137	142	Right-handed alpha
Helix 91	AK1	F	146	150	Right-handed 310
Helix 92	AK2	F	152	156	Right-handed 310
Helix 93	AK3	F	167	204	Right-handed alpha
Helix 94	AK4	F	208	247	Right-handed alpha
Helix 95	AK5	F	258	265	Right-handed alpha
Helix 96	AK6	F	279	288	Right-handed alpha
Helix 97	AK7	G	2	8	Right-handed alpha
Helix 98	AK8	G	9	14	Right-handed alpha
Helix 99	AK9	G	14	38	Right-handed alpha
Helix 100	AL1	G	46	69	Right-handed alpha
Helix 101	AL2	G	70	78	Right-handed alpha
Helix 102	AL3	G	79	87	Right-handed 310
Helix 103	AL4	G	94	107	Right-handed alpha
Helix 104	AL5	G	108	121	Right-handed alpha
Helix 105	AL6	G	122	131	Right-handed alpha
Helix 106	AL7	G	137	142	Right-handed alpha
Helix 107	AL8	G	146	150	Right-handed 310
Helix 108	AL9	G	152	156	Right-handed 310
Helix 109	AM1	G	167	204	Right-handed alpha
Helix 110	AM2	G	208	247	Right-handed alpha
Helix 111	AM3	G	258	265	Right-handed alpha
Helix 112	AM4	G	279	288	Right-handed alpha
Helix 113	AM5	H	2	8	Right-handed alpha
Helix 114	AM6	H	9	14	Right-handed alpha
Helix 115	AM7	H	14	38	Right-handed alpha
Helix 116	AM8	H	46	69	Right-handed alpha
Helix 117	AM9	H	70	78	Right-handed alpha
Helix 118	AN1	H	79	87	Right-handed 310
Helix 119	AN2	H	94	107	Right-handed alpha
Helix 120	AN3	H	108	121	Right-handed alpha
Helix 121	AN4	H	122	131	Right-handed alpha
Helix 122	AN5	H	137	142	Right-handed alpha
Helix 123	AN6	H	146	150	Right-handed 310
Helix 124	AN7	H	152	156	Right-handed 310
Helix 125	AN8	H	167	204	Right-handed alpha
Helix 126	AN9	H	208	247	Right-handed alpha
Helix 127	AO1	H	258	265	Right-handed alpha
Helix 128	AO2	H	279	288	Right-handed alpha
Helix 129	AO3	I	2	8	Right-handed alpha
Helix 130	AO4	I	9	14	Right-handed alpha
Helix 131	AO5	I	14	38	Right-handed alpha
Helix 132	AO6	I	46	69	Right-handed alpha
Helix 133	AO7	I	70	78	Right-handed alpha
Helix 134	AO8	I	79	87	Right-handed 310
Helix 135	AO9	I	94	107	Right-handed alpha
Helix 136	AP1	I	108	121	Right-handed alpha
Helix 137	AP2	I	122	131	Right-handed alpha
Helix 138	AP3	I	137	142	Right-handed alpha
Helix 139	AP4	I	146	150	Right-handed 310
Helix 140	AP5	I	152	156	Right-handed 310
Helix 141	AP6	I	167	204	Right-handed alpha
Helix 142	AP7	I	208	247	Right-handed alpha
Helix 143	AP8	I	258	265	Right-handed alpha
Helix 144	AP9	I	279	288	Right-handed alpha
Helix 145	AQ1	J	2	8	Right-handed alpha
Helix 146	AQ2	J	9	14	Right-handed alpha
Helix 147	AQ3	J	14	38	Right-handed alpha
Helix 148	AQ4	J	46	69	Right-handed alpha
Helix 149	AQ5	J	70	78	Right-handed alpha
Helix 150	AQ6	J	79	87	Right-handed 310
Helix 151	AQ7	J	94	107	Right-handed alpha
Helix 152	AQ8	J	108	121	Right-handed alpha
Helix 153	AQ9	J	122	131	Right-handed alpha
Helix 154	AR1	J	137	142	Right-handed alpha
Helix 155	AR2	J	146	150	Right-handed 310
Helix 156	AR3	J	152	156	Right-handed 310
Helix 157	AR4	J	167	204	Right-handed alpha
Helix 158	AR5	J	208	247	Right-handed alpha
Helix 159	AR6	J	258	265	Right-handed alpha
Helix 160	AR7	J	279	288	Right-handed alpha
Helix 161	AR8	K	2	8	Right-handed alpha
Helix 162	AR9	K	9	14	Right-handed alpha
Helix 163	AS1	K	14	38	Right-handed alpha
Helix 164	AS2	K	46	69	Right-handed alpha
Helix 165	AS3	K	70	78	Right-handed alpha
Helix 166	AS4	K	79	87	Right-handed 310
Helix 167	AS5	K	94	107	Right-handed alpha
Helix 168	AS6	K	108	121	Right-handed alpha
Helix 169	AS7	K	122	131	Right-handed alpha
Helix 170	AS8	K	137	142	Right-handed alpha
Helix 171	AS9	K	146	150	Right-handed 310
Helix 172	AT1	K	152	156	Right-handed 310
Helix 173	AT2	K	167	204	Right-handed alpha
Helix 174	AT3	K	208	247	Right-handed alpha
Helix 175	AT4	K	258	265	Right-handed alpha
Helix 176	AT5	K	279	288	Right-handed alpha

There are no sheets in PDB entry 7D60

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7D60

Analysis of interatomic Contacts of Structural Units in PDB entry:
7D60