Analysis of interatomic Contacts of Structural Units in PDB entry:
7D6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D6C entry

There are 6 chains in PDB entry 7D6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 ALA 16SER 182
2
 ALA 16PRO 184
3
 SER 11THR 116
4
 SER 11ALA 114
5
 GLN -2PRO 118
F
 PHE -3PRO 117
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 7D6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
158 164Right-handed alpha
Helix 2
AA2
1
171 180Right-handed alpha
Helix 3
AA3
2
158 164Right-handed alpha
Helix 4
AA4
2
169 180Right-handed alpha
Back to top of page

There are 20 sheets in PDB entry 7D6C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
19 20first strand
Strand 2
1
36 38parallel
Strand 3
1
58 60parallel
Strand 4
1
90 92parallel
Strand 5
1
103 110parallel
Strand 6
1
121 127parallel
Strand 7
1
143 144parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
31 34first strand
Strand 2
1
49 52parallel
Strand 3
1
71 73parallel
Strand 4
1
103 110parallel
Strand 5
1
121 127parallel
Strand 6
1
138 140parallel
Strand 7
1
155 156parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
25 26first strand
Strand 2
1
43 44parallel
Strand 3
1
65 66parallel
Strand 4
1
97 98parallel
Strand 5
1
115 116parallel
Strand 6
1
132 133parallel
Strand 7
1
149 150parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
80 81first strand
Strand 2
1
87 88anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
19 20first strand
Strand 2
2
36 38parallel
Strand 3
2
58 60parallel
Strand 4
2
90 92parallel
Strand 5
2
103 110parallel
Strand 6
2
121 127parallel
Strand 7
2
143 144parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
31 33first strand
Strand 2
2
49 51parallel
Strand 3
2
71 72parallel
Strand 4
2
103 110parallel
Strand 5
2
121 127parallel
Strand 6
2
138 140parallel
Strand 7
2
155 156parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
25 26first strand
Strand 2
2
43 44parallel
Strand 3
2
65 66parallel
Strand 4
2
97 98parallel
Strand 5
2
115 116parallel
Strand 6
2
132 133parallel
Strand 7
2
149 150parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
80 81first strand
Strand 2
2
87 88anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
15 17first strand
Strand 2
3
33 36parallel
Strand 3
3
55 65parallel
Strand 4
3
41 44parallel
Strand 5
3
20 22parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
15 17first strand
Strand 2
3
33 36parallel
Strand 3
3
55 65parallel
Strand 4
3
76 83parallel
Strand 5
3
94 96parallel
Strand 6
3
111 113parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
26 28first strand
Strand 2
3
48 50parallel
Strand 3
3
70 71parallel
Strand 4
3
88 89parallel
Strand 5
3
105 106parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
15 17first strand
Strand 2
4
33 36parallel
Strand 3
4
55 65parallel
Strand 4
4
41 44parallel
Strand 5
4
19 22parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
15 17first strand
Strand 2
4
33 36parallel
Strand 3
4
55 65parallel
Strand 4
4
76 83parallel
Strand 5
4
94 96parallel
Strand 6
4
111 113parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
27 28first strand
Strand 2
4
49 50parallel
Strand 3
4
70 71parallel
Strand 4
4
88 89parallel
Strand 5
4
105 106parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
15 17first strand
Strand 2
5
33 36parallel
Strand 3
5
55 65parallel
Strand 4
5
41 44parallel
Strand 5
5
19 22parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
15 17first strand
Strand 2
5
33 36parallel
Strand 3
5
55 65parallel
Strand 4
5
76 83parallel
Strand 5
5
94 96parallel
Strand 6
5
111 113parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
27 28first strand
Strand 2
5
49 50parallel
Strand 3
5
70 71parallel
Strand 4
5
88 89parallel
Strand 5
5
105 106parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
15 17first strand
Strand 2
F
33 36parallel
Strand 3
F
55 65parallel
Strand 4
F
41 44parallel
Strand 5
F
19 20parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
15 17first strand
Strand 2
F
33 36parallel
Strand 3
F
55 65parallel
Strand 4
F
76 83parallel
Strand 5
F
94 96parallel
Strand 6
F
111 113parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
27 28first strand
Strand 2
F
49 50parallel
Strand 3
F
70 71parallel
Strand 4
F
88 89parallel
Strand 5
F
105 106parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il