Analysis of interatomic Contacts of Structural Units in PDB entry:
7D6E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7D6E entry

There are 18 chains in PDB entry 7D6E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 142	SER 521
B	PHE 142	SER 521
C	PHE 142	SER 521
D	PHE 142	SER 521
E	PHE 142	SER 521
F	PHE 142	SER 521
G	PHE 142	SER 521
H	PHE 142	SER 521
I	PHE 142	SER 521
J	PHE 142	SER 521
K	PHE 142	SER 521
L	PHE 142	SER 521
M	PHE 142	SER 521
N	PHE 142	SER 521
O	PHE 142	SER 521
P	PHE 142	SER 521
Q	PHE 142	SER 521
R	PHE 142	SER 521

There are144 helices in PDB entry 7D6E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	189	204	Right-handed alpha
Helix 2	AA2	A	231	251	Right-handed alpha
Helix 3	AA3	A	251	256	Right-handed alpha
Helix 4	AA4	A	257	265	Right-handed alpha
Helix 5	AA5	A	279	301	Right-handed alpha
Helix 6	AA6	A	303	354	Right-handed alpha
Helix 7	AA7	A	360	435	Right-handed alpha
Helix 8	AA8	A	441	514	Right-handed alpha
Helix 9	AA9	B	189	204	Right-handed alpha
Helix 10	AB1	B	231	251	Right-handed alpha
Helix 11	AB2	B	251	256	Right-handed alpha
Helix 12	AB3	B	257	265	Right-handed alpha
Helix 13	AB4	B	279	301	Right-handed alpha
Helix 14	AB5	B	303	354	Right-handed alpha
Helix 15	AB6	B	360	435	Right-handed alpha
Helix 16	AB7	B	441	514	Right-handed alpha
Helix 17	AB8	C	189	204	Right-handed alpha
Helix 18	AB9	C	231	251	Right-handed alpha
Helix 19	AC1	C	251	256	Right-handed alpha
Helix 20	AC2	C	257	265	Right-handed alpha
Helix 21	AC3	C	279	301	Right-handed alpha
Helix 22	AC4	C	303	354	Right-handed alpha
Helix 23	AC5	C	360	435	Right-handed alpha
Helix 24	AC6	C	441	514	Right-handed alpha
Helix 25	AC7	D	189	204	Right-handed alpha
Helix 26	AC8	D	231	251	Right-handed alpha
Helix 27	AC9	D	251	256	Right-handed alpha
Helix 28	AD1	D	257	265	Right-handed alpha
Helix 29	AD2	D	279	301	Right-handed alpha
Helix 30	AD3	D	303	354	Right-handed alpha
Helix 31	AD4	D	360	435	Right-handed alpha
Helix 32	AD5	D	441	514	Right-handed alpha
Helix 33	AD6	E	189	204	Right-handed alpha
Helix 34	AD7	E	231	251	Right-handed alpha
Helix 35	AD8	E	251	256	Right-handed alpha
Helix 36	AD9	E	257	265	Right-handed alpha
Helix 37	AE1	E	279	301	Right-handed alpha
Helix 38	AE2	E	303	354	Right-handed alpha
Helix 39	AE3	E	360	435	Right-handed alpha
Helix 40	AE4	E	441	514	Right-handed alpha
Helix 41	AE5	F	189	204	Right-handed alpha
Helix 42	AE6	F	231	251	Right-handed alpha
Helix 43	AE7	F	251	256	Right-handed alpha
Helix 44	AE8	F	257	265	Right-handed alpha
Helix 45	AE9	F	279	301	Right-handed alpha
Helix 46	AF1	F	303	354	Right-handed alpha
Helix 47	AF2	F	360	435	Right-handed alpha
Helix 48	AF3	F	441	514	Right-handed alpha
Helix 49	AF4	G	189	204	Right-handed alpha
Helix 50	AF5	G	231	251	Right-handed alpha
Helix 51	AF6	G	251	256	Right-handed alpha
Helix 52	AF7	G	257	265	Right-handed alpha
Helix 53	AF8	G	279	301	Right-handed alpha
Helix 54	AF9	G	303	354	Right-handed alpha
Helix 55	AG1	G	360	435	Right-handed alpha
Helix 56	AG2	G	441	514	Right-handed alpha
Helix 57	AG3	H	189	204	Right-handed alpha
Helix 58	AG4	H	231	251	Right-handed alpha
Helix 59	AG5	H	251	256	Right-handed alpha
Helix 60	AG6	H	257	265	Right-handed alpha
Helix 61	AG7	H	279	301	Right-handed alpha
Helix 62	AG8	H	303	354	Right-handed alpha
Helix 63	AG9	H	360	435	Right-handed alpha
Helix 64	AH1	H	441	514	Right-handed alpha
Helix 65	AH2	I	189	204	Right-handed alpha
Helix 66	AH3	I	231	251	Right-handed alpha
Helix 67	AH4	I	251	256	Right-handed alpha
Helix 68	AH5	I	257	265	Right-handed alpha
Helix 69	AH6	I	279	301	Right-handed alpha
Helix 70	AH7	I	303	354	Right-handed alpha
Helix 71	AH8	I	360	435	Right-handed alpha
Helix 72	AH9	I	441	514	Right-handed alpha
Helix 73	AI1	J	189	204	Right-handed alpha
Helix 74	AI2	J	231	251	Right-handed alpha
Helix 75	AI3	J	251	256	Right-handed alpha
Helix 76	AI4	J	257	265	Right-handed alpha
Helix 77	AI5	J	279	301	Right-handed alpha
Helix 78	AI6	J	303	354	Right-handed alpha
Helix 79	AI7	J	360	435	Right-handed alpha
Helix 80	AI8	J	441	514	Right-handed alpha
Helix 81	AI9	K	189	204	Right-handed alpha
Helix 82	AJ1	K	231	251	Right-handed alpha
Helix 83	AJ2	K	251	256	Right-handed alpha
Helix 84	AJ3	K	257	265	Right-handed alpha
Helix 85	AJ4	K	279	301	Right-handed alpha
Helix 86	AJ5	K	303	354	Right-handed alpha
Helix 87	AJ6	K	360	435	Right-handed alpha
Helix 88	AJ7	K	441	514	Right-handed alpha
Helix 89	AJ8	L	189	204	Right-handed alpha
Helix 90	AJ9	L	231	251	Right-handed alpha
Helix 91	AK1	L	251	256	Right-handed alpha
Helix 92	AK2	L	257	265	Right-handed alpha
Helix 93	AK3	L	279	301	Right-handed alpha
Helix 94	AK4	L	303	354	Right-handed alpha
Helix 95	AK5	L	360	435	Right-handed alpha
Helix 96	AK6	L	441	514	Right-handed alpha
Helix 97	AK7	M	189	204	Right-handed alpha
Helix 98	AK8	M	231	251	Right-handed alpha
Helix 99	AK9	M	251	256	Right-handed alpha
Helix 100	AL1	M	257	265	Right-handed alpha
Helix 101	AL2	M	279	301	Right-handed alpha
Helix 102	AL3	M	303	354	Right-handed alpha
Helix 103	AL4	M	360	435	Right-handed alpha
Helix 104	AL5	M	441	514	Right-handed alpha
Helix 105	AL6	N	189	204	Right-handed alpha
Helix 106	AL7	N	231	251	Right-handed alpha
Helix 107	AL8	N	251	256	Right-handed alpha
Helix 108	AL9	N	257	265	Right-handed alpha
Helix 109	AM1	N	279	301	Right-handed alpha
Helix 110	AM2	N	303	354	Right-handed alpha
Helix 111	AM3	N	360	435	Right-handed alpha
Helix 112	AM4	N	441	514	Right-handed alpha
Helix 113	AM5	O	189	204	Right-handed alpha
Helix 114	AM6	O	231	251	Right-handed alpha
Helix 115	AM7	O	251	256	Right-handed alpha
Helix 116	AM8	O	257	265	Right-handed alpha
Helix 117	AM9	O	279	301	Right-handed alpha
Helix 118	AN1	O	303	354	Right-handed alpha
Helix 119	AN2	O	360	435	Right-handed alpha
Helix 120	AN3	O	441	514	Right-handed alpha
Helix 121	AN4	P	189	204	Right-handed alpha
Helix 122	AN5	P	231	251	Right-handed alpha
Helix 123	AN6	P	251	256	Right-handed alpha
Helix 124	AN7	P	257	265	Right-handed alpha
Helix 125	AN8	P	279	301	Right-handed alpha
Helix 126	AN9	P	303	354	Right-handed alpha
Helix 127	AO1	P	360	435	Right-handed alpha
Helix 128	AO2	P	441	514	Right-handed alpha
Helix 129	AO3	Q	189	204	Right-handed alpha
Helix 130	AO4	Q	231	251	Right-handed alpha
Helix 131	AO5	Q	251	256	Right-handed alpha
Helix 132	AO6	Q	257	265	Right-handed alpha
Helix 133	AO7	Q	279	301	Right-handed alpha
Helix 134	AO8	Q	303	354	Right-handed alpha
Helix 135	AO9	Q	360	435	Right-handed alpha
Helix 136	AP1	Q	441	514	Right-handed alpha
Helix 137	AP2	R	189	204	Right-handed alpha
Helix 138	AP3	R	231	251	Right-handed alpha
Helix 139	AP4	R	251	256	Right-handed alpha
Helix 140	AP5	R	257	265	Right-handed alpha
Helix 141	AP6	R	279	301	Right-handed alpha
Helix 142	AP7	R	303	354	Right-handed alpha
Helix 143	AP8	R	360	435	Right-handed alpha
Helix 144	AP9	R	441	514	Right-handed alpha

There are 18 sheets in PDB entry 7D6E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	153	first strand
Strand 2	A	162	168	anti-parallel
Strand 3	A	180	185	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	153	first strand
Strand 2	B	162	168	anti-parallel
Strand 3	B	180	185	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	153	first strand
Strand 2	C	162	168	anti-parallel
Strand 3	C	180	185	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	153	first strand
Strand 2	D	162	168	anti-parallel
Strand 3	D	180	185	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	153	first strand
Strand 2	E	162	168	anti-parallel
Strand 3	E	180	185	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	146	153	first strand
Strand 2	F	162	168	anti-parallel
Strand 3	F	180	185	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	153	first strand
Strand 2	G	162	168	anti-parallel
Strand 3	G	180	185	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	146	153	first strand
Strand 2	H	162	168	anti-parallel
Strand 3	H	180	185	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	146	153	first strand
Strand 2	I	162	168	anti-parallel
Strand 3	I	180	185	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	146	153	first strand
Strand 2	J	162	168	anti-parallel
Strand 3	J	180	185	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	146	153	first strand
Strand 2	K	162	168	anti-parallel
Strand 3	K	180	185	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	146	153	first strand
Strand 2	L	162	168	anti-parallel
Strand 3	L	180	185	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	146	153	first strand
Strand 2	M	162	168	anti-parallel
Strand 3	M	180	185	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	146	153	first strand
Strand 2	N	162	168	anti-parallel
Strand 3	N	180	185	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	146	153	first strand
Strand 2	O	162	168	anti-parallel
Strand 3	O	180	185	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	146	153	first strand
Strand 2	P	162	168	anti-parallel
Strand 3	P	180	185	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	146	153	first strand
Strand 2	Q	162	168	anti-parallel
Strand 3	Q	180	185	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	146	153	first strand
Strand 2	R	162	168	anti-parallel
Strand 3	R	180	185	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7D6E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7D6E