Analysis of interatomic Contacts of Structural Units in PDB entry:
7D6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D6F entry

There are 2 chains in PDB entry 7D6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 916GLN 1008
B
 PHE 1754LEU 1762
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 7D6F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
960 966Right-handed alpha
Helix 2
AA2
A
986 996Right-handed alpha
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There are 2 sheets in PDB entry 7D6F. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
918 923first strand
Strand 2
A
1000 1005anti-parallel
Strand 3
A
976 977anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
952 956first strand
Strand 2
A
932 936anti-parallel
Strand 3
B
1758 1761anti-parallel
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