Analysis of interatomic Contacts of Structural Units in PDB entry:
7D6J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D6J entry

There are 2 chains in PDB entry 7D6J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LYS 573
B
 LYS 4GLU 571
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 7D6J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 75Right-handed alpha
Helix 5
AA5
A
94 105Right-handed alpha
Helix 6
AA6
A
119 130Right-handed alpha
Helix 7
AA7
A
130 146Right-handed alpha
Helix 8
AA8
A
150 168Right-handed alpha
Helix 9
AA9
A
177 205Right-handed alpha
Helix 10
AB1
A
206 223Right-handed alpha
Helix 11
AB2
A
227 247Right-handed alpha
Helix 12
AB3
A
249 265Right-handed alpha
Helix 13
AB4
A
282 290Right-handed alpha
Helix 14
AB5
A
314 322Right-handed alpha
Helix 15
AB6
A
322 336Right-handed alpha
Helix 16
AB7
A
342 361Right-handed alpha
Helix 17
AB8
A
373 376Right-handed 310
Helix 18
AB9
A
377 399Right-handed alpha
Helix 19
AC1
A
399 413Right-handed alpha
Helix 20
AC2
A
419 438Right-handed alpha
Helix 21
AC3
A
444 467Right-handed alpha
Helix 22
AC4
A
470 479Right-handed alpha
Helix 23
AC5
A
483 490Right-handed alpha
Helix 24
AC6
A
510 514Right-handed 310
Helix 25
AC7
A
517 534Right-handed alpha
Helix 26
AC8
A
540 561Right-handed alpha
Helix 27
AC9
B
5 15Right-handed alpha
Helix 28
AD1
B
15 31Right-handed alpha
Helix 29
AD2
B
36 56Right-handed alpha
Helix 30
AD3
B
65 75Right-handed alpha
Helix 31
AD4
B
94 105Right-handed alpha
Helix 32
AD5
B
119 130Right-handed alpha
Helix 33
AD6
B
130 146Right-handed alpha
Helix 34
AD7
B
150 169Right-handed alpha
Helix 35
AD8
B
174 205Right-handed alpha
Helix 36
AD9
B
206 223Right-handed alpha
Helix 37
AE1
B
227 246Right-handed alpha
Helix 38
AE2
B
249 265Right-handed alpha
Helix 39
AE3
B
267 271Right-handed 310
Helix 40
AE4
B
282 290Right-handed alpha
Helix 41
AE5
B
315 322Right-handed alpha
Helix 42
AE6
B
323 337Right-handed alpha
Helix 43
AE7
B
342 362Right-handed alpha
Helix 44
AE8
B
365 370Right-handed alpha
Helix 45
AE9
B
371 373Right-handed 310
Helix 46
AF1
B
377 391Right-handed alpha
Helix 47
AF2
B
392 413Right-handed alpha
Helix 48
AF3
B
419 432Right-handed alpha
Helix 49
AF4
B
433 438Right-handed alpha
Helix 50
AF5
B
446 465Right-handed alpha
Helix 51
AF6
B
470 478Right-handed alpha
Helix 52
AF7
B
481 483Right-handed 310
Helix 53
AF8
B
484 490Right-handed alpha
Helix 54
AF9
B
510 514Right-handed 310
Helix 55
AG1
B
517 534Right-handed alpha
Helix 56
AG2
B
540 559Right-handed alpha
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There are no sheets in PDB entry 7D6J
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