Analysis of interatomic Contacts of Structural Units in PDB entry:
7D6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D6P entry

There is 1 chain in PDB entry 7D6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 46THR 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7D6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 59Right-handed alpha
Helix 2
AA2
A
61 81Right-handed alpha
Helix 3
AA3
A
89 93Right-handed 310
Helix 4
AA4
A
106 109Right-handed 310
Helix 5
AA5
A
156 163Right-handed alpha
Helix 6
AA6
A
194 198Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7D6P.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 105first strand
Strand 2
A
110 116anti-parallel
Strand 3
A
127 129parallel
Strand 4
A
142 148anti-parallel
Strand 5
A
204 211parallel
Strand 6
A
220 228anti-parallel
Strand 7
A
177 189anti-parallel
Strand 8
A
169 174anti-parallel
Strand 9
A
99 105anti-parallel
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