Analysis of interatomic Contacts of Structural Units in PDB entry:
7D6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D6T entry

There are 2 chains in PDB entry 7D6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 43LEU 230
B
 ALA 46LEU 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7D6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 58Right-handed alpha
Helix 2
AA2
A
61 81Right-handed alpha
Helix 3
AA3
A
89 93Right-handed 310
Helix 4
AA4
A
106 109Right-handed 310
Helix 5
AA5
A
119 126Right-handed alpha
Helix 6
AA6
A
158 164Right-handed 310
Helix 7
AA7
A
190 194Right-handed 310
Helix 8
AA8
B
47 59Right-handed alpha
Helix 9
AA9
B
61 81Right-handed alpha
Helix 10
AB1
B
89 93Right-handed 310
Helix 11
AB2
B
106 109Right-handed 310
Helix 12
AB3
B
119 124Right-handed alpha
Helix 13
AB4
B
149 154Right-handed alpha
Helix 14
AB5
B
158 164Right-handed 310
Helix 15
AB6
B
194 198Right-handed 310
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There are 2 sheets in PDB entry 7D6T. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 105first strand
Strand 2
A
110 116anti-parallel
Strand 3
A
127 129parallel
Strand 4
A
142 147anti-parallel
Strand 5
A
204 212parallel
Strand 6
A
219 228anti-parallel
Strand 7
A
177 189anti-parallel
Strand 8
A
169 174anti-parallel
Strand 9
A
99 105anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 105first strand
Strand 2
B
110 116anti-parallel
Strand 3
B
127 129parallel
Strand 4
B
142 148anti-parallel
Strand 5
B
204 212parallel
Strand 6
B
219 228anti-parallel
Strand 7
B
177 189anti-parallel
Strand 8
B
169 174anti-parallel
Strand 9
B
99 105anti-parallel
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