Analysis of interatomic Contacts of Structural Units in PDB entry:
7D7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D7N entry

There are 2 chains in PDB entry 7D7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 27GLY 827
B
 PHE 27GLY 827
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 7D7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 39Right-handed alpha
Helix 2
AA2
A
41 48Right-handed alpha
Helix 3
AA3
A
71 94Right-handed alpha
Helix 4
AA4
A
106 132Right-handed alpha
Helix 5
AA5
A
147 159Right-handed alpha
Helix 6
AA6
A
161 167Right-handed alpha
Helix 7
AA7
A
185 206Right-handed alpha
Helix 8
AA8
A
242 253Right-handed alpha
Helix 9
AA9
A
261 297Right-handed alpha
Helix 10
AB1
A
306 321Right-handed alpha
Helix 11
AB2
A
322 353Right-handed alpha
Helix 12
AB3
A
357 363Right-handed alpha
Helix 13
AB4
A
365 390Right-handed alpha
Helix 14
AB5
A
391 409Right-handed alpha
Helix 15
AB6
A
412 459Right-handed alpha
Helix 16
AB7
A
459 466Right-handed alpha
Helix 17
AB8
A
471 523Right-handed alpha
Helix 18
AB9
A
529 542Right-handed alpha
Helix 19
AC1
A
543 549Right-handed alpha
Helix 20
AC2
A
550 568Right-handed alpha
Helix 21
AC3
A
627 637Right-handed alpha
Helix 22
AC4
A
659 664Right-handed alpha
Helix 23
AC5
A
680 686Right-handed alpha
Helix 24
AC6
A
692 704Right-handed alpha
Helix 25
AC7
A
705 712Right-handed alpha
Helix 26
AC8
A
728 744Right-handed alpha
Helix 27
AC9
A
758 774Right-handed alpha
Helix 28
AD1
A
807 815Right-handed alpha
Helix 29
AD2
A
816 827Right-handed alpha
Helix 30
AD3
B
28 39Right-handed alpha
Helix 31
AD4
B
41 48Right-handed alpha
Helix 32
AD5
B
71 94Right-handed alpha
Helix 33
AD6
B
106 132Right-handed alpha
Helix 34
AD7
B
147 159Right-handed alpha
Helix 35
AD8
B
161 167Right-handed alpha
Helix 36
AD9
B
185 206Right-handed alpha
Helix 37
AE1
B
242 253Right-handed alpha
Helix 38
AE2
B
261 297Right-handed alpha
Helix 39
AE3
B
306 321Right-handed alpha
Helix 40
AE4
B
322 353Right-handed alpha
Helix 41
AE5
B
357 363Right-handed alpha
Helix 42
AE6
B
365 390Right-handed alpha
Helix 43
AE7
B
391 409Right-handed alpha
Helix 44
AE8
B
412 459Right-handed alpha
Helix 45
AE9
B
459 466Right-handed alpha
Helix 46
AF1
B
471 523Right-handed alpha
Helix 47
AF2
B
529 542Right-handed alpha
Helix 48
AF3
B
543 549Right-handed alpha
Helix 49
AF4
B
550 568Right-handed alpha
Helix 50
AF5
B
627 637Right-handed alpha
Helix 51
AF6
B
659 664Right-handed alpha
Helix 52
AF7
B
680 686Right-handed alpha
Helix 53
AF8
B
692 704Right-handed alpha
Helix 54
AF9
B
705 712Right-handed alpha
Helix 55
AG1
B
728 744Right-handed alpha
Helix 56
AG2
B
758 774Right-handed alpha
Helix 57
AG3
B
807 815Right-handed alpha
Helix 58
AG4
B
816 827Right-handed alpha
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There are 6 sheets in PDB entry 7D7N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 613first strand
Strand 2
A
590 593anti-parallel
Strand 3
A
646 649anti-parallel
Strand 4
A
652 653anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 669first strand
Strand 2
A
747 751parallel
Strand 3
A
777 781parallel
Strand 4
A
618 622parallel
Strand 5
A
793 798parallel
Strand 6
A
801 806anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
678 679first strand
Strand 2
A
719 720anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
611 613first strand
Strand 2
B
590 593anti-parallel
Strand 3
B
646 649anti-parallel
Strand 4
B
652 653anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
666 669first strand
Strand 2
B
747 751parallel
Strand 3
B
777 781parallel
Strand 4
B
618 622parallel
Strand 5
B
793 798parallel
Strand 6
B
801 806anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
678 679first strand
Strand 2
B
719 720anti-parallel
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