Analysis of interatomic Contacts of Structural Units in PDB entry:
7D90


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7D90 entry

There are 2 chains in PDB entry 7D90 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 183ILE 1146
B
 PRO 183ILE 1146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 7D90. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
187 192Right-handed alpha
Helix 2
AA2
A
192 198Right-handed alpha
Helix 3
AA3
A
202 207Right-handed alpha
Helix 4
AA4
A
207 216Right-handed alpha
Helix 5
AA5
A
217 244Right-handed alpha
Helix 6
AA6
A
252 259Right-handed alpha
Helix 7
AA7
A
261 294Right-handed alpha
Helix 8
AA8
A
309 335Right-handed alpha
Helix 9
AA9
A
336 343Right-handed alpha
Helix 10
AB1
A
343 366Right-handed alpha
Helix 11
AB2
A
403 410Right-handed alpha
Helix 12
AB3
A
422 427Right-handed alpha
Helix 13
AB4
A
484 493Right-handed alpha
Helix 14
AB5
A
494 496Right-handed 310
Helix 15
AB6
A
498 504Right-handed 310
Helix 16
AB7
A
505 509Right-handed 310
Helix 17
AB8
A
511 540Right-handed alpha
Helix 18
AB9
A
543 548Right-handed alpha
Helix 19
AC1
A
549 553Right-handed 310
Helix 20
AC2
A
561 565Right-handed 310
Helix 21
AC3
A
568 600Right-handed alpha
Helix 22
AC4
A
604 612Right-handed 310
Helix 23
AC5
A
621 635Right-handed alpha
Helix 24
AC6
A
638 667Right-handed alpha
Helix 25
AC7
A
680 699Right-handed alpha
Helix 26
AC8
A
699 726Right-handed alpha
Helix 27
AC9
A
730 743Right-handed alpha
Helix 28
AD1
A
774 782Right-handed alpha
Helix 29
AD2
A
803 819Right-handed alpha
Helix 30
AD3
A
834 845Right-handed alpha
Helix 31
AD4
A
869 886Right-handed alpha
Helix 32
AD5
A
895 899Right-handed 310
Helix 33
AD6
A
921 932Right-handed alpha
Helix 34
AD7
A
952 967Right-handed alpha
Helix 35
AD8
A
983 993Right-handed alpha
Helix 36
AD9
A
1079 1099Right-handed alpha
Helix 37
AE1
A
1117 1129Right-handed alpha
Helix 38
AE2
B
187 192Right-handed alpha
Helix 39
AE3
B
192 198Right-handed alpha
Helix 40
AE4
B
202 207Right-handed alpha
Helix 41
AE5
B
207 216Right-handed alpha
Helix 42
AE6
B
217 244Right-handed alpha
Helix 43
AE7
B
252 259Right-handed alpha
Helix 44
AE8
B
261 294Right-handed alpha
Helix 45
AE9
B
309 335Right-handed alpha
Helix 46
AF1
B
336 343Right-handed alpha
Helix 47
AF2
B
343 366Right-handed alpha
Helix 48
AF3
B
403 410Right-handed alpha
Helix 49
AF4
B
422 427Right-handed alpha
Helix 50
AF5
B
484 493Right-handed alpha
Helix 51
AF6
B
494 496Right-handed 310
Helix 52
AF7
B
498 504Right-handed 310
Helix 53
AF8
B
505 509Right-handed 310
Helix 54
AF9
B
511 540Right-handed alpha
Helix 55
AG1
B
543 548Right-handed alpha
Helix 56
AG2
B
549 553Right-handed 310
Helix 57
AG3
B
561 565Right-handed 310
Helix 58
AG4
B
568 600Right-handed alpha
Helix 59
AG5
B
604 612Right-handed 310
Helix 60
AG6
B
621 635Right-handed alpha
Helix 61
AG7
B
638 667Right-handed alpha
Helix 62
AG8
B
680 699Right-handed alpha
Helix 63
AG9
B
699 726Right-handed alpha
Helix 64
AH1
B
730 743Right-handed alpha
Helix 65
AH2
B
774 782Right-handed alpha
Helix 66
AH3
B
803 819Right-handed alpha
Helix 67
AH4
B
834 845Right-handed alpha
Helix 68
AH5
B
869 886Right-handed alpha
Helix 69
AH6
B
895 899Right-handed 310
Helix 70
AH7
B
921 932Right-handed alpha
Helix 71
AH8
B
952 967Right-handed alpha
Helix 72
AH9
B
983 993Right-handed alpha
Helix 73
AI1
B
1079 1099Right-handed alpha
Helix 74
AI2
B
1117 1129Right-handed alpha
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There are 6 sheets in PDB entry 7D90. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
430 433anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 394first strand
Strand 2
A
401 402anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
826 832first strand
Strand 2
A
790 797parallel
Strand 3
A
759 762parallel
Strand 4
A
855 858parallel
Strand 5
A
889 894parallel
Strand 6
A
1135 1139anti-parallel
Strand 7
A
1101 1107parallel
Strand 8
A
907 913parallel
Strand 9
A
938 946parallel
Strand 10
A
972 976parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 376first strand
Strand 2
B
430 433anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 394first strand
Strand 2
B
401 402anti-parallel
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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
826 832first strand
Strand 2
B
790 797parallel
Strand 3
B
759 762parallel
Strand 4
B
855 858parallel
Strand 5
B
889 894parallel
Strand 6
B
1135 1139anti-parallel
Strand 7
B
1101 1107parallel
Strand 8
B
907 913parallel
Strand 9
B
938 946parallel
Strand 10
B
972 976parallel
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