Analysis of interatomic Contacts of Structural Units in PDB entry:
7DC4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DC4 entry

There are 2 chains in PDB entry 7DC4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 133
B
 MET 1GLY 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7DC4

There are 2 sheets in PDB entry 7DC4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 9first strand
Strand 2
A
17 24anti-parallel
Strand 3
A
84 91anti-parallel
Strand 4
A
70 76anti-parallel
Strand 5
A
59 67anti-parallel
Strand 6
A
46 53anti-parallel
Strand 7
A
33 39anti-parallel
Strand 8
A
100 106anti-parallel
Strand 9
A
115 120anti-parallel
Strand 10
A
125 132anti-parallel
Strand 11
A
3 9anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 9first strand
Strand 2
B
17 24anti-parallel
Strand 3
B
85 91anti-parallel
Strand 4
B
70 76anti-parallel
Strand 5
B
59 67anti-parallel
Strand 6
B
46 53anti-parallel
Strand 7
B
33 39anti-parallel
Strand 8
B
100 106anti-parallel
Strand 9
B
115 120anti-parallel
Strand 10
B
125 132anti-parallel
Strand 11
B
3 9anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il