Analysis of interatomic Contacts of Structural Units in PDB entry:
7DEY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DEY entry

There are 4 chains in PDB entry 7DEY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 201LEU 430
B
 LYS 201LEU 429
C
 LYS 201LEU 430
D
 LYS 201LEU 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7DEY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
210 219Right-handed alpha
Helix 2
AA2
A
242 263Right-handed alpha
Helix 3
AA3
A
267 280Right-handed alpha
Helix 4
AA4
A
280 291Right-handed alpha
Helix 5
AA5
A
292 297Right-handed alpha
Helix 6
AA6
A
311 328Right-handed alpha
Helix 7
AA7
A
333 353Right-handed alpha
Helix 8
AA8
A
363 373Right-handed alpha
Helix 9
AA9
A
411 425Right-handed alpha
Helix 10
AB1
B
210 219Right-handed alpha
Helix 11
AB2
B
242 263Right-handed alpha
Helix 12
AB3
B
267 279Right-handed alpha
Helix 13
AB4
B
280 291Right-handed alpha
Helix 14
AB5
B
292 297Right-handed alpha
Helix 15
AB6
B
311 328Right-handed alpha
Helix 16
AB7
B
333 344Right-handed alpha
Helix 17
AB8
B
344 355Right-handed alpha
Helix 18
AB9
B
363 373Right-handed alpha
Helix 19
AC1
B
411 425Right-handed alpha
Helix 20
AC2
C
210 219Right-handed alpha
Helix 21
AC3
C
241 263Right-handed alpha
Helix 22
AC4
C
267 279Right-handed alpha
Helix 23
AC5
C
280 291Right-handed alpha
Helix 24
AC6
C
292 297Right-handed alpha
Helix 25
AC7
C
312 329Right-handed alpha
Helix 26
AC8
C
333 344Right-handed alpha
Helix 27
AC9
C
344 355Right-handed alpha
Helix 28
AD1
C
363 373Right-handed alpha
Helix 29
AD2
C
411 425Right-handed alpha
Helix 30
AD3
D
210 219Right-handed alpha
Helix 31
AD4
D
242 263Right-handed alpha
Helix 32
AD5
D
267 280Right-handed alpha
Helix 33
AD6
D
280 291Right-handed alpha
Helix 34
AD7
D
292 297Right-handed alpha
Helix 35
AD8
D
311 328Right-handed alpha
Helix 36
AD9
D
333 355Right-handed alpha
Helix 37
AE1
D
363 373Right-handed alpha
Helix 38
AE2
D
411 425Right-handed alpha
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There are 4 sheets in PDB entry 7DEY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 385first strand
Strand 2
A
394 399anti-parallel
Strand 3
A
402 408anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 385first strand
Strand 2
B
393 399anti-parallel
Strand 3
B
402 409anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
380 385first strand
Strand 2
C
394 399anti-parallel
Strand 3
C
402 408anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
381 384first strand
Strand 2
D
393 398anti-parallel
Strand 3
D
403 409anti-parallel
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