Analysis of interatomic Contacts of Structural Units in PDB entry:
7DF1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DF1 entry

There are 12 chains in PDB entry 7DF1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 115	PRO 526
B	GLN 115	PRO 526
C	GLN 115	PRO 526
D	GLN 115	PRO 526
H	VAL 2	SER 112
L	ASP 1	ILE 106
E	VAL 2	SER 112
I	ASP 1	ILE 106
F	VAL 2	SER 112
J	ASP 1	ILE 106
G	VAL 2	SER 112
K	ASP 1	ILE 106

There are 99 helices in PDB entry 7DF1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	116	120	Right-handed 310
Helix 2	AA2	A	128	134	Right-handed alpha
Helix 3	AA3	A	139	144	Right-handed alpha
Helix 4	AA4	A	146	153	Right-handed alpha
Helix 5	AA5	A	181	184	Right-handed 310
Helix 6	AA6	A	185	199	Right-handed alpha
Helix 7	AA7	A	221	240	Right-handed alpha
Helix 8	AA8	A	248	252	Right-handed 310
Helix 9	AA9	A	254	270	Right-handed alpha
Helix 10	AB1	A	283	292	Right-handed alpha
Helix 11	AB2	A	310	325	Right-handed alpha
Helix 12	AB3	A	339	343	Right-handed 310
Helix 13	AB4	A	345	357	Right-handed alpha
Helix 14	AB5	A	368	372	Right-handed 310
Helix 15	AB6	A	374	378	Right-handed 310
Helix 16	AB7	A	398	402	Right-handed 310
Helix 17	AB8	A	403	406	Right-handed 310
Helix 18	AB9	A	407	413	Right-handed alpha
Helix 19	AC1	A	417	432	Right-handed alpha
Helix 20	AC2	A	432	437	Right-handed alpha
Helix 21	AC3	B	116	120	Right-handed 310
Helix 22	AC4	B	128	134	Right-handed alpha
Helix 23	AC5	B	139	144	Right-handed alpha
Helix 24	AC6	B	146	153	Right-handed alpha
Helix 25	AC7	B	181	184	Right-handed 310
Helix 26	AC8	B	185	199	Right-handed alpha
Helix 27	AC9	B	221	240	Right-handed alpha
Helix 28	AD1	B	248	252	Right-handed 310
Helix 29	AD2	B	254	270	Right-handed alpha
Helix 30	AD3	B	283	293	Right-handed alpha
Helix 31	AD4	B	310	325	Right-handed alpha
Helix 32	AD5	B	339	343	Right-handed 310
Helix 33	AD6	B	345	347	Right-handed 310
Helix 34	AD7	B	348	357	Right-handed alpha
Helix 35	AD8	B	368	372	Right-handed 310
Helix 36	AD9	B	374	378	Right-handed 310
Helix 37	AE1	B	398	402	Right-handed 310
Helix 38	AE2	B	403	406	Right-handed 310
Helix 39	AE3	B	407	413	Right-handed alpha
Helix 40	AE4	B	417	432	Right-handed alpha
Helix 41	AE5	B	432	437	Right-handed alpha
Helix 42	AE6	C	116	120	Right-handed 310
Helix 43	AE7	C	128	134	Right-handed alpha
Helix 44	AE8	C	139	145	Right-handed alpha
Helix 45	AE9	C	146	153	Right-handed alpha
Helix 46	AF1	C	181	184	Right-handed 310
Helix 47	AF2	C	185	199	Right-handed alpha
Helix 48	AF3	C	221	240	Right-handed alpha
Helix 49	AF4	C	248	252	Right-handed 310
Helix 50	AF5	C	254	270	Right-handed alpha
Helix 51	AF6	C	283	292	Right-handed alpha
Helix 52	AF7	C	315	325	Right-handed alpha
Helix 53	AF8	C	339	343	Right-handed 310
Helix 54	AF9	C	345	347	Right-handed 310
Helix 55	AG1	C	348	357	Right-handed alpha
Helix 56	AG2	C	368	372	Right-handed 310
Helix 57	AG3	C	374	378	Right-handed 310
Helix 58	AG4	C	398	402	Right-handed 310
Helix 59	AG5	C	403	406	Right-handed 310
Helix 60	AG6	C	407	413	Right-handed alpha
Helix 61	AG7	C	417	432	Right-handed alpha
Helix 62	AG8	C	432	437	Right-handed alpha
Helix 63	AG9	D	116	120	Right-handed 310
Helix 64	AH1	D	128	134	Right-handed alpha
Helix 65	AH2	D	139	145	Right-handed alpha
Helix 66	AH3	D	146	153	Right-handed alpha
Helix 67	AH4	D	181	184	Right-handed 310
Helix 68	AH5	D	185	199	Right-handed alpha
Helix 69	AH6	D	221	240	Right-handed alpha
Helix 70	AH7	D	248	252	Right-handed 310
Helix 71	AH8	D	254	270	Right-handed alpha
Helix 72	AH9	D	283	292	Right-handed alpha
Helix 73	AI1	D	315	325	Right-handed alpha
Helix 74	AI2	D	339	343	Right-handed 310
Helix 75	AI3	D	345	347	Right-handed 310
Helix 76	AI4	D	348	357	Right-handed alpha
Helix 77	AI5	D	368	372	Right-handed 310
Helix 78	AI6	D	374	378	Right-handed 310
Helix 79	AI7	D	398	402	Right-handed 310
Helix 80	AI8	D	403	406	Right-handed 310
Helix 81	AI9	D	407	413	Right-handed alpha
Helix 82	AJ1	D	417	432	Right-handed alpha
Helix 83	AJ2	D	432	437	Right-handed alpha
Helix 84	AJ3	H	28	32	Right-handed 310
Helix 85	AJ4	H	61	64	Right-handed 310
Helix 86	AJ5	H	83	87	Right-handed 310
Helix 87	AJ6	L	79	83	Right-handed 310
Helix 88	AJ7	E	28	32	Right-handed 310
Helix 89	AJ8	E	61	64	Right-handed 310
Helix 90	AJ9	E	83	87	Right-handed 310
Helix 91	AK1	I	79	83	Right-handed 310
Helix 92	AK2	F	28	32	Right-handed 310
Helix 93	AK3	F	61	64	Right-handed 310
Helix 94	AK4	F	83	87	Right-handed 310
Helix 95	AK5	J	79	83	Right-handed 310
Helix 96	AK6	G	28	32	Right-handed 310
Helix 97	AK7	G	61	64	Right-handed 310
Helix 98	AK8	G	83	87	Right-handed 310
Helix 99	AK9	K	79	83	Right-handed 310

There are 44 sheets in PDB entry 7DF1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	300	first strand
Strand 2	A	274	278	parallel
Strand 3	A	243	246	parallel
Strand 4	A	202	206	parallel
Strand 5	A	157	160	parallel
Strand 6	A	123	126	parallel
Strand 7	A	362	366	parallel
Strand 8	A	331	332	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	166	first strand
Strand 2	A	174	179	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	442	first strand
Strand 2	A	449	454	anti-parallel
Strand 3	A	461	467	anti-parallel
Strand 4	A	520	525	anti-parallel
Strand 5	A	491	497	anti-parallel
Strand 6	A	507	509	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	514	515	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	300	first strand
Strand 2	B	274	278	parallel
Strand 3	B	243	246	parallel
Strand 4	B	202	206	parallel
Strand 5	B	157	160	parallel
Strand 6	B	123	126	parallel
Strand 7	B	362	366	parallel
Strand 8	B	331	332	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	166	first strand
Strand 2	B	174	179	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	442	first strand
Strand 2	B	449	454	anti-parallel
Strand 3	B	461	467	anti-parallel
Strand 4	B	520	525	anti-parallel
Strand 5	B	491	497	anti-parallel
Strand 6	B	507	509	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	514	515	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	298	300	first strand
Strand 2	C	274	278	parallel
Strand 3	C	243	246	parallel
Strand 4	C	202	206	parallel
Strand 5	C	157	160	parallel
Strand 6	C	123	126	parallel
Strand 7	C	362	366	parallel
Strand 8	C	331	332	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	166	first strand
Strand 2	C	174	179	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	442	first strand
Strand 2	C	449	454	anti-parallel
Strand 3	C	461	467	anti-parallel
Strand 4	C	520	525	anti-parallel
Strand 5	C	491	497	anti-parallel
Strand 6	C	507	509	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	514	515	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	274	278	parallel
Strand 3	D	243	246	parallel
Strand 4	D	202	206	parallel
Strand 5	D	157	160	parallel
Strand 6	D	123	126	parallel
Strand 7	D	362	366	parallel
Strand 8	D	331	332	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	164	166	first strand
Strand 2	D	174	179	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	440	441	first strand
Strand 2	D	449	454	anti-parallel
Strand 3	D	461	467	anti-parallel
Strand 4	D	520	525	anti-parallel
Strand 5	D	491	497	anti-parallel
Strand 6	D	507	509	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	474	first strand
Strand 2	D	514	515	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	95	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	95	anti-parallel
Strand 4	H	100	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	70	75	anti-parallel
Strand 4	L	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	12	first strand
Strand 2	L	102	105	parallel
Strand 3	L	84	90	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	49	anti-parallel
Strand 6	L	53	54	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	12	first strand
Strand 2	L	102	105	parallel
Strand 3	L	84	90	anti-parallel
Strand 4	L	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	27	27	first strand
Strand 2	L	30	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	6	first strand
Strand 2	E	18	25	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	107	111	parallel
Strand 3	E	88	95	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	107	111	parallel
Strand 3	E	88	95	anti-parallel
Strand 4	E	100	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	7	first strand
Strand 2	I	19	25	anti-parallel
Strand 3	I	70	75	anti-parallel
Strand 4	I	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	102	105	parallel
Strand 3	I	84	90	anti-parallel
Strand 4	I	33	38	anti-parallel
Strand 5	I	45	49	anti-parallel
Strand 6	I	53	54	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	102	105	parallel
Strand 3	I	84	90	anti-parallel
Strand 4	I	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	27	27	first strand
Strand 2	I	30	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	6	first strand
Strand 2	F	18	25	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	12	first strand
Strand 2	F	107	111	parallel
Strand 3	F	88	95	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	45	51	anti-parallel
Strand 6	F	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	12	first strand
Strand 2	F	107	111	parallel
Strand 3	F	88	95	anti-parallel
Strand 4	F	100	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	4	7	first strand
Strand 2	J	19	25	anti-parallel
Strand 3	J	70	75	anti-parallel
Strand 4	J	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	102	105	parallel
Strand 3	J	85	90	anti-parallel
Strand 4	J	33	38	anti-parallel
Strand 5	J	45	49	anti-parallel
Strand 6	J	53	54	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	102	105	parallel
Strand 3	J	85	90	anti-parallel
Strand 4	J	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	27	27	first strand
Strand 2	J	30	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	6	first strand
Strand 2	G	18	25	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	107	111	parallel
Strand 3	G	88	95	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	45	51	anti-parallel
Strand 6	G	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	107	111	parallel
Strand 3	G	88	95	anti-parallel
Strand 4	G	100	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	7	first strand
Strand 2	K	19	25	anti-parallel
Strand 3	K	70	75	anti-parallel
Strand 4	K	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	102	105	parallel
Strand 3	K	85	90	anti-parallel
Strand 4	K	33	38	anti-parallel
Strand 5	K	45	49	anti-parallel
Strand 6	K	53	54	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	102	105	parallel
Strand 3	K	85	90	anti-parallel
Strand 4	K	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	27	27	first strand
Strand 2	K	30	31	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DF1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DF1